G31329


Basic Information

Item Value
gene id G31329
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2635184 ~ 2638120 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39249
TTACAGTTCTAAACCTGCCCACATGTCGCTTCATTGTTTATTCATTCCATTTGTACACTAACTGAACAAGAAATGATGCACAGATACTTTGACATGCCTGGGCAGCGCTCATCGATCTGCCATCCCAAATCCAGCCAGTGATTTACAACCCAGTCTTTATTAGATTTCACTACAAccaaataaatctgttttccaCAGCTCCAGCAGACATGCTGTGTAATTCGTCCATTGTCATtggatttcttagcagacacccatatccagggtgccttacagttgttacaatatatcacattattgttacacacaattacccatttatacaggtgCGTTTGTACTGGATCAATCTCGGCACAGAGCCACGCTCAAGGGTGCAACAGCAGTGTCTCAGGACACAGAACCACTGTTTGTTAAGGGAGGGGGAAATTTAAATTCCCTGCTTTGCCTGATTAAGAATCTGATTATTAGAATCAGatgcacatttttttctgtCCCTGGTCATGAGGATGAGTAATATGAATGACATGCTTCGAGTGGAGATCTgctgtagtgtttttttaattctttattgtCCTTGGATGATCTCTGGTATTTCAAATGAGTATCGTCCTCAGAGCTACCTCCTCTGAGGGCAATACTGTAAACTCTGTACTACGTCTCCATTGAAAACCtctattgattatatatatatatatatatatataaatggaaaacaaaacctcaaAGCATATTATAAATGGCTTATTTGTAGATAAATATAGAGTTCATCATCCACATCAGGCTTTTCCCCCAAAGGTATAGTTAGTCACACAAACATCATATATACATTGCAATCATTCAACAAGACCACGAAATAGAGGCGAGGGTTTAACTAAGTGCTTGTGTCGATACAGAGTCTTAATAGTCTGCAAAGGTCATGGTGTTGGCAATGGTTAGTTGGAAAAATCACACAACGCATCCTTCTATGAAAAGAGACTTGGAGAATCTTATTTTTATCTTAGTCTTATTCCCCAAAACCAATCCAGTTTGCTCCCTTGAGGAATGGCCCACCAGCGTGCGGACGAGGCCAGCGGTCTGACCAGCTGCGCCGCTCCGTGTCACCTCACTGCAGTCTAAACGATGTGCCTTTAATGGAGAGGCACTATTAATGAGAGCATGATATTTCCCCCAGATCTCAGTGATATGACTGAGAAACAGACGACGGACTTAAAAGGCAGGCTGTAAAATGAGAAATTAACGCTGAGCTGAGTGCCCAGCCGGCTCGCGGGGATGAGAGAGAAATGTCTGCAGCTCATACTTTATACAGAGCTAATGTAGGTAATGACACTGATTTGAAATGTCCAAGTTGTTTTGGAGCAACCTTTGATGCCAATTCCCGTCCCACTAATATGCACCTGGCCACTGAACTCCGAGTCTAATATGCTGTAGGTCTTTCATTGCTGAAAAGCCAATAAATGCACCTTCTCTTTCCAGCAAGTTTCCAGTCCATGGTTTATAATGGAAACTGCAGACTAAACCATCACCAAACCAAGAAAAGCTGGTGTGTGTTTTCCGAATTAGCCCTGGCGAGgttgaattgtgtgtgtgtgtgtgtgtgtgtgtgtgcgggtggggggggctggTTTGAAGAGAGGTGCGTCCCGTCTGAATTTGAATGCAGTTCTGGTGTGTTCAGACACCACCAcatccctccttccctccctcgcTTCCTGCAGTCTCACAAGAAGACGGGCACCTCTAGCTTGGTGCGGAGGTGTGCCCGTTTCCTCTCCCGCTCCTGGACGTAGCCCTGCAGCTTGTCGGTGGAGAAATAGACCACGGAGTGCCGGTGCTTAGAGGCGGGGACGCCCTGTATCCACGGTAAGCGAAGGCACTCGGCGGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39249 True 1884 lncRNA 0.45 2 2635184 2638120

Neighbor

gene id symbol gene type direction distance location
AMCG00019087 NA coding downstream 110055 2520913 ~ 2525129 (-)
AMCG00019085 NA coding downstream 150445 2471464 ~ 2484739 (-)
AMCG00019084 smarcd3,LOC106578675 coding downstream 201109 2409940 ~ 2434075 (-)
AMCG00019077 abcf2 coding downstream 248035 2380537 ~ 2387149 (-)
AMCG00019079 NA coding downstream 277329 2342598 ~ 2357855 (-)
AMCG00019092 NA coding upstream 380 2638500 ~ 2657544 (-)
AMCG00019091 arf1,arf3,LOC103038497,LOC102781726,LOC107671731 coding upstream 38195 2676315 ~ 2686173 (-)
AMCG00019093 wnt3a,LOC107661901 coding upstream 119980 2758100 ~ 2759745 (-)
AMCG00019094 wnt3a coding upstream 130660 2768780 ~ 2785358 (-)
AMCG00019097 NA coding upstream 439770 3077890 ~ 3094196 (-)
G31300 NA non-coding downstream 63896 2566801 ~ 2571288 (-)
G31296 NA non-coding downstream 72390 2561475 ~ 2562794 (-)
G31246 NA non-coding downstream 125990 2500133 ~ 2509194 (-)
G31245 NA non-coding downstream 138617 2494716 ~ 2496567 (-)
G31244 NA non-coding downstream 141129 2493837 ~ 2494055 (-)
G31346 NA non-coding upstream 216328 2854448 ~ 2856659 (-)
G31363 jmjd4,LOC107727496,LOC107661892 non-coding upstream 458589 3096709 ~ 3097340 (-)
G31390 NA non-coding upstream 550607 3188727 ~ 3190187 (-)
G31399 NA non-coding upstream 573284 3211404 ~ 3211605 (-)
G31431 NA non-coding upstream 706737 3344857 ~ 3345240 (-)
G31130 NA other downstream 456534 2177980 ~ 2178650 (-)
G31082 NA other downstream 551913 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 738752 1882454 ~ 1896432 (-)
G31035 NA other downstream 924641 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 1311588 1321614 ~ 1323596 (-)
AMCG00019109 NA other upstream 1582323 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 2294229 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 2302939 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 4042505 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 6209031 8847151 ~ 8901878 (-)

Expression


Co-expression Network