G31351


Basic Information

Item Value
gene id G31351
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 3076916 ~ 3077156 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39274
GGTTCGGTAAAACAAGCTGCTGAAGGAGGACGACGCAGTGGTGTGTCAAGTATGCAGTCGGAGTGGAGAAAGTATTGCCTATATTGGACTGTCCAACTCAGATCCCATTTACAGTGTTTTAAGATAttttgaatgaaagaaagacataAAAAAGCAGCATAAAGAATCACCAAGATGCAATGTGTTCCAAAACGTATTATTGTCCCTCAAccggaaaaacaaaaaaggaagtaaataaaaa

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU39274 True 241 lncRNA 0.38 1 3076916 3077156

Neighbor

gene id symbol gene type direction distance location
AMCG00019095 wnt9a,LOC106599874 coding upstream 226916 2845380 ~ 2850000 (+)
AMCG00019088 NA coding upstream 411052 2658553 ~ 2665864 (+)
AMCG00019090 NA coding upstream 440513 2619235 ~ 2636403 (+)
AMCG00019086 NA coding upstream 575277 2491498 ~ 2501639 (+)
AMCG00019083 NA coding upstream 587928 2487342 ~ 2488988 (+)
AMCG00019101 ccny,LOC107739127,LOC107588043,LOC108431590 coding downstream 180505 3257661 ~ 3275357 (+)
AMCG00019099 NA coding downstream 205004 3282160 ~ 3285119 (+)
AMCG00019104 LOC107588097 coding downstream 554579 3631735 ~ 3635688 (+)
AMCG00019107 NA coding downstream 1171237 4248393 ~ 4249743 (+)
AMCG00019106 NA coding downstream 1191095 4268251 ~ 4282752 (+)
G31217 NA non-coding upstream 667029 2404126 ~ 2409887 (+)
G31141 NA non-coding upstream 867727 2188968 ~ 2209189 (+)
G31143 NA non-coding upstream 884708 2191421 ~ 2192208 (+)
G31117 NA non-coding upstream 899560 2177148 ~ 2177356 (+)
G31104 NA non-coding upstream 977764 2097181 ~ 2099152 (+)
G31380 NA non-coding downstream 62531 3139687 ~ 3165672 (+)
G31430 NA non-coding downstream 267599 3344755 ~ 3345244 (+)
G31432 NA non-coding downstream 276184 3353340 ~ 3388685 (+)
G31461 NA non-coding downstream 787033 3864189 ~ 3864604 (+)
G31566 NA non-coding downstream 1670392 4747548 ~ 4747749 (+)
AMCG00019089 NA other upstream 458864 2520104 ~ 2618052 (+)
G31110 NA other upstream 929353 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 1191365 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 1471371 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 1755423 1318622 ~ 1321493 (+)
AMCG00019096 LOC107727496 other downstream 17296 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 113456 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 1242440 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 2853548 5930704 ~ 5939597 (+)
G32005 NA other downstream 4343345 7420501 ~ 7421083 (+)

Expression


Co-expression Network