G31390


Basic Information

Item Value
gene id G31390
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 3188727 ~ 3190187 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39319
CGGGGGGCGAGTCCGGGCGGCGGGCTGCAGGAGGCCGCGCTGCGCAGGCCGGGCAGCCAGGCACAGCGGTTTAACCGAAGCCGTTTTAAAAGACGCAGCGGTGGACGCGGCCGGCCGGGCGGGCGGGCAGAGACCCTCGGAGCGGAAAGCGGACACACTCGCTCCGTCTGCGGGGGCGCTGTAgtggcgcagatgtccgcagctctgcgcagctctgcgcagacctgcggaaacCAACCCATCCTATTGGTGGAGCCGAGCAGCACTGCGATACCTTGTGTTGCCGAGTGAGTTGTGTGGCTGTGTAAACCCATAGTAGCGATGCACTCAGCAGACATGTTTGTTAAGTGGAAAGAATGAGAGTGCCGGCACATGCGGTCCTGAGAACTGTATCGACGTGATCGTATTGTGACAGTATTTTACATTAGACTGACAACCCCCAGCACATTAGGAAACCTGAGAAACTAGACCTGATCTTCCTGGTCTGAAACGTATTGGACAACAGCCATATTTTACTCTTTAACTCCCCAGTTTAGTAACTAGAAttctaaaagtaaaaacaagtaACACATGAACAATATTAGCCTACAGATCAGTTTAAATCCGACATTGTTGGGTAGATGGCAAAACACATTGCTGTTGGTTTGAGTTTTACTTTTATGACGATACTGGCACGTAAGGTAATGTATGCAAAGTTTATTAGACACCCACTGCAAAGCTGTAAGGCCTATCCATTTAATATAGTGTGATAGAAATCTTCATCTGAAATAGCTTTGTCTTACTGTAGTCATTTAAATGAGTGAATTCAAATATTTGCATTCTTACATGCCTCTGTGTTTCCCCTAAATGTCAGTagttctttttaatctttttttttttaacaatgtaacTGTGATAATACTATATACAGGCTACGTTATTAAAACTGTATGtctctgaaaataattacatgaattaaGTTATAGTTGTTATTTTATAGCGACACACAGTGGTTAAAACGAGTTTTGAAGAGTTGGTCAGCTGCTACATTGGGTTTTGCAAACAATGAAGGATTTTTCTGGATAAAAGAAAAATTGTGATCTGGGATCCAGGTttggtgaaaaaataaacacctttgTCAGATTGAAACACCCCAAATCACtctaataataacagaaaaagaTAATTGATAATGTGTCCAATTAAGTGACTTCTGCTTTGTTGCTTGTACTGCTTGTTTGATTTCATGACATCCTTTGGAGTATAATTTGACTTGTACATTTCTATGTTGTGTTACTTGGCaattacataacaaaataaaaatctacaaCTTAACTGTTATCTAACTAAGTATCTGAGCTAAACATGTCTGTACACACCTTTATTAGTCATTTATGGATTTAGGAatcacaaatgcatacatttgtataaaagcaaataaagttcatgtatatttaaatagtaaataaagactacataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39319 True 1461 lncRNA 0.41 1 3188727 3190187

Neighbor

gene id symbol gene type direction distance location
AMCG00019102 NA coding downstream 15291 3171748 ~ 3173436 (-)
AMCG00019098 NA coding downstream 20597 3150830 ~ 3168130 (-)
AMCG00019097 NA coding downstream 94531 3077890 ~ 3094196 (-)
AMCG00019094 wnt3a coding downstream 403369 2768780 ~ 2785358 (-)
AMCG00019093 wnt3a,LOC107661901 coding downstream 428982 2758100 ~ 2759745 (-)
AMCG00019103 fzd8,fzd8a,LOC106578536,LOC102789550 coding upstream 108151 3298338 ~ 3300086 (-)
AMCG00019105 NA coding upstream 688509 3878696 ~ 4065944 (-)
AMCG00019110 NA coding upstream 985288 4175475 ~ 4176838 (-)
AMCG00019108 NA coding upstream 995553 4185740 ~ 4207481 (-)
AMCG00019112 NA coding upstream 1178960 4369147 ~ 4383176 (-)
G31363 jmjd4,LOC107727496,LOC107661892 non-coding downstream 91387 3096709 ~ 3097340 (-)
G31346 NA non-coding downstream 332068 2854448 ~ 2856659 (-)
G31329 NA non-coding downstream 550607 2635184 ~ 2638120 (-)
G31300 NA non-coding downstream 617439 2566801 ~ 2571288 (-)
G31296 NA non-coding downstream 625933 2561475 ~ 2562794 (-)
G31399 NA non-coding upstream 21217 3211404 ~ 3211605 (-)
G31431 NA non-coding upstream 154670 3344857 ~ 3345240 (-)
G31444 NA non-coding upstream 412213 3602400 ~ 3602611 (-)
G31454 NA non-coding upstream 443669 3633856 ~ 3638241 (-)
G31470 NA non-coding upstream 745713 3935900 ~ 3936123 (-)
G31130 NA other downstream 1010077 2177980 ~ 2178650 (-)
G31082 NA other downstream 1105456 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 1292295 1882454 ~ 1896432 (-)
G31035 NA other downstream 1478184 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 1865131 1321614 ~ 1323596 (-)
AMCG00019109 NA other upstream 1030256 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 1742162 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 1750872 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 3490438 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 5656964 8847151 ~ 8901878 (-)

Expression


Co-expression Network