G31430


Basic Information

Item Value
gene id G31430
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 3344755 ~ 3345244 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39362
GAATATCAAGCCCTCAGGAATACCTTCCTTCAGTTTtctcccattattattattatttttatttcttggcagatgcccttatccagggcgacttacagagaagtacaaggcatcaatcattacaaattcaacttagctaaaacatagcaattcaaaataatacattttacaaattccaatttacaatttacacaagtacagtaagagacttcctacatcctggacggtgaaagctaagtgctgtcaagatgtagggttacagacgagggctacgggaaagggagcaaggaggaaagcaatcaagaacgcgaggagcataataagctgaagtgctatctagcagggatagaggactaatattacaagtgctgtcggaagagatgcgtcttgagtaagcgccggaatgaggtcaaggactctgctgttttgacttcggtgggcaggtcgttccaccacttaggggccagggatgagaaggagcagctctgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39362 True 490 lncRNA 0.43 1 3344755 3345244

Neighbor

gene id symbol gene type direction distance location
AMCG00019099 NA coding upstream 59636 3282160 ~ 3285119 (+)
AMCG00019101 ccny,LOC107739127,LOC107588043,LOC108431590 coding upstream 69398 3257661 ~ 3275357 (+)
AMCG00019095 wnt9a,LOC106599874 coding upstream 494755 2845380 ~ 2850000 (+)
AMCG00019088 NA coding upstream 678891 2658553 ~ 2665864 (+)
AMCG00019090 NA coding upstream 708352 2619235 ~ 2636403 (+)
AMCG00019104 LOC107588097 coding downstream 286491 3631735 ~ 3635688 (+)
AMCG00019107 NA coding downstream 903149 4248393 ~ 4249743 (+)
AMCG00019106 NA coding downstream 923007 4268251 ~ 4282752 (+)
AMCG00019113 rheb,LOC106579659 coding downstream 1064739 4409983 ~ 4423443 (+)
AMCG00019114 crygn,LOC102796340 coding downstream 1085652 4430896 ~ 4433550 (+)
G31380 NA non-coding upstream 179083 3139687 ~ 3165672 (+)
G31351 NA non-coding upstream 267599 3076916 ~ 3077156 (+)
G31217 NA non-coding upstream 934868 2404126 ~ 2409887 (+)
G31141 NA non-coding upstream 1135566 2188968 ~ 2209189 (+)
G31143 NA non-coding upstream 1152547 2191421 ~ 2192208 (+)
G31432 NA non-coding downstream 8096 3353340 ~ 3388685 (+)
G31461 NA non-coding downstream 518945 3864189 ~ 3864604 (+)
G31566 NA non-coding downstream 1402304 4747548 ~ 4747749 (+)
G31622 NA non-coding downstream 1627728 4972972 ~ 5030095 (+)
G31663 NA non-coding downstream 1748637 5093881 ~ 5127629 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 133865 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 244584 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 726703 2520104 ~ 2618052 (+)
G31110 NA other upstream 1197192 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 1459204 1861829 ~ 1885551 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 974352 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 2585460 5930704 ~ 5939597 (+)
G32005 NA other downstream 4075257 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 5000211 8345455 ~ 8384592 (+)
G32286 NA other downstream 5916130 9261374 ~ 9539211 (+)

Expression


Co-expression Network