G31432


Basic Information

Item Value
gene id G31432
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 3353340 ~ 3388685 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39364
tgtgtgtgtgtatgtatgtatatatatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccggtctgagtattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39364 True 245 lncRNA 0.39 2 3353340 3388685

Neighbor

gene id symbol gene type direction distance location
AMCG00019099 NA coding upstream 68221 3282160 ~ 3285119 (+)
AMCG00019101 ccny,LOC107739127,LOC107588043,LOC108431590 coding upstream 77983 3257661 ~ 3275357 (+)
AMCG00019095 wnt9a,LOC106599874 coding upstream 503340 2845380 ~ 2850000 (+)
AMCG00019088 NA coding upstream 687476 2658553 ~ 2665864 (+)
AMCG00019090 NA coding upstream 716937 2619235 ~ 2636403 (+)
AMCG00019104 LOC107588097 coding downstream 243050 3631735 ~ 3635688 (+)
AMCG00019107 NA coding downstream 859708 4248393 ~ 4249743 (+)
AMCG00019106 NA coding downstream 879566 4268251 ~ 4282752 (+)
AMCG00019113 rheb,LOC106579659 coding downstream 1021298 4409983 ~ 4423443 (+)
AMCG00019114 crygn,LOC102796340 coding downstream 1042211 4430896 ~ 4433550 (+)
G31430 NA non-coding upstream 8096 3344755 ~ 3345244 (+)
G31380 NA non-coding upstream 187668 3139687 ~ 3165672 (+)
G31351 NA non-coding upstream 276184 3076916 ~ 3077156 (+)
G31217 NA non-coding upstream 943453 2404126 ~ 2409887 (+)
G31141 NA non-coding upstream 1144151 2188968 ~ 2209189 (+)
G31461 NA non-coding downstream 475504 3864189 ~ 3864604 (+)
G31566 NA non-coding downstream 1358863 4747548 ~ 4747749 (+)
G31622 NA non-coding downstream 1584287 4972972 ~ 5030095 (+)
G31663 NA non-coding downstream 1705196 5093881 ~ 5127629 (+)
G31690 NA non-coding downstream 1789249 5177934 ~ 5183039 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 142450 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 253169 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 735288 2520104 ~ 2618052 (+)
G31110 NA other upstream 1205777 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 1467789 1861829 ~ 1885551 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 930911 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 2542019 5930704 ~ 5939597 (+)
G32005 NA other downstream 4031816 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 4956770 8345455 ~ 8384592 (+)
G32286 NA other downstream 5872689 9261374 ~ 9539211 (+)

Expression


Co-expression Network