Gene
RNA
| Item | Value |
|---|---|
| gene id | G31526 |
| gene name | LOC106599727,LOC106569160,LOC102785278 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 4365162 ~ 4365401 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: PH domain leucine-rich repeat-containing protein phosphatase 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU39459 | True | 240 | lncRNA | 0.67 | 1 | 4365162 | 4365401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019108 | NA | coding | downstream | 157681 | 4185740 ~ 4207481 (-) |
| AMCG00019110 | NA | coding | downstream | 188324 | 4175475 ~ 4176838 (-) |
| AMCG00019105 | NA | coding | downstream | 299218 | 3878696 ~ 4065944 (-) |
| AMCG00019103 | fzd8,fzd8a,LOC106578536,LOC102789550 | coding | downstream | 1065076 | 3298338 ~ 3300086 (-) |
| AMCG00019102 | NA | coding | downstream | 1191726 | 3171748 ~ 3173436 (-) |
| AMCG00019112 | NA | coding | upstream | 3746 | 4369147 ~ 4383176 (-) |
| AMCG00019117 | NA | coding | upstream | 92059 | 4457460 ~ 4468048 (-) |
| AMCG00019116 | NA | coding | upstream | 106755 | 4472156 ~ 4475867 (-) |
| AMCG00019123 | LOC108436082,LOC106579582 | coding | upstream | 402068 | 4767469 ~ 4791923 (-) |
| AMCG00019122 | NA | coding | upstream | 458548 | 4823949 ~ 4840696 (-) |
| G31525 | NA | non-coding | downstream | 118 | 4364196 ~ 4365044 (-) |
| G31523 | NA | non-coding | downstream | 4816 | 4360107 ~ 4360346 (-) |
| G31522 | NA | non-coding | downstream | 8091 | 4356856 ~ 4357071 (-) |
| G31520 | NA | non-coding | downstream | 11542 | 4353418 ~ 4353620 (-) |
| G31519 | NA | non-coding | downstream | 14172 | 4350687 ~ 4350990 (-) |
| G31558 | NA | non-coding | upstream | 242162 | 4607563 ~ 4607857 (-) |
| G31572 | NA | non-coding | upstream | 312242 | 4677643 ~ 4678067 (-) |
| G31774 | NA | non-coding | upstream | 1053595 | 5418996 ~ 5511930 (-) |
| G31784 | gars,LOC107591252,LOC107754935,LOC107682953,LOC107584992,LOC107733158 | non-coding | upstream | 1174719 | 5540120 ~ 5540948 (-) |
| G31803 | NA | non-coding | upstream | 1207396 | 5572797 ~ 5574265 (-) |
| AMCG00019109 | NA | other | downstream | 135171 | 4220443 ~ 4229991 (-) |
| G31130 | NA | other | downstream | 2186512 | 2177980 ~ 2178650 (-) |
| G31082 | NA | other | downstream | 2281891 | 1932341 ~ 2083271 (-) |
| AMCG00019059 | NA | other | downstream | 2468730 | 1882454 ~ 1896432 (-) |
| G31035 | NA | other | downstream | 2654619 | 1705899 ~ 1710543 (-) |
| AMCG00019129 | NA | other | upstream | 566948 | 4932349 ~ 4940667 (-) |
| AMCG00019128 | gorasp1,LOC103377203 | other | upstream | 575658 | 4941059 ~ 4986384 (-) |
| AMCG00019165 | NA | other | upstream | 2315224 | 6680625 ~ 6684301 (-) |
| AMCG00019209 | LOC106600477 | other | upstream | 4481750 | 8847151 ~ 8901878 (-) |
| AMCG00019213 | NA | other | upstream | 4885751 | 9251152 ~ 9434114 (-) |
