G31833


Basic Information

Item Value
gene id G31833
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 5923714 ~ 5927593 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39839
ggaTGTCCAACAGAATGGGATGATATACGCTGCTGGCCCAGGGCTGATGTGGGCCACAGCATCAGCGTGACTTGCTCTGAAGTCTTTCAGCACTTCCCAACTAAAAAAGGGTTCATCTTTAGAAATTGTTCGAGTGAGGGCTGGACAGAACCTTACCCTCCATATCCAGAGGCCTGTGGATTTGCCGAAGACCCAGAACCTGAAATTGAGAAAACATACTATTCCACATTTAAACATGTCTACACTGCAGGCTATTCCACATCATTGATTTCATTAATAACCGCAATTATTATCTTCACTGCATTCAG

Function

NR:

description
PREDICTED: unconventional myosin-Va isoform X3

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39839 True 308 lncRNA 0.44 3 5923714 5927593

Neighbor

gene id symbol gene type direction distance location
AMCG00019152 NA coding downstream 150017 5755405 ~ 5773697 (-)
AMCG00019150 LOC104941974 coding downstream 251728 5635702 ~ 5671986 (-)
AMCG00019149 zbtb47,zbtb47b,LOC107701620,LOC107733141,LOC107754947,LOC107670424 coding downstream 335372 5582228 ~ 5588342 (-)
AMCG00019145 LOC103360289 coding downstream 487594 5419981 ~ 5436120 (-)
AMCG00019144 NA coding downstream 518008 5391065 ~ 5405706 (-)
AMCG00019153 NA coding upstream 20296 5947889 ~ 5962147 (-)
AMCG00019155 NA coding upstream 198600 6126193 ~ 6145464 (-)
AMCG00019158 NA coding upstream 230272 6157865 ~ 6161502 (-)
AMCG00019157 NA coding upstream 237590 6165183 ~ 6191211 (-)
AMCG00019161 myl3,LOC107660402,LOC107567878,LOC107711693,LOC107593749,LOC107727541 coding upstream 506919 6434512 ~ 6451611 (-)
G31831 NA non-coding downstream 21077 5902372 ~ 5902637 (-)
G31829 NA non-coding downstream 106281 5817076 ~ 5817433 (-)
G31826 NA non-coding downstream 120799 5784768 ~ 5802915 (-)
G31825 NA non-coding downstream 171628 5749887 ~ 5752086 (-)
G31803 NA non-coding downstream 349449 5572797 ~ 5574265 (-)
G31845 NA non-coding upstream 36671 5964264 ~ 5986796 (-)
G31875 NA non-coding upstream 236396 6163989 ~ 6164537 (-)
G31878 NA non-coding upstream 335044 6262637 ~ 6262838 (-)
G31882 NA non-coding upstream 337098 6264691 ~ 6265136 (-)
G31931 NA non-coding upstream 759910 6687503 ~ 6687816 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 937330 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 983047 4932349 ~ 4940667 (-)
AMCG00019109 NA other downstream 1693723 4220443 ~ 4229991 (-)
G31130 NA other downstream 3745064 2177980 ~ 2178650 (-)
G31082 NA other downstream 3840443 1932341 ~ 2083271 (-)
AMCG00019165 NA other upstream 753032 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 2919558 8847151 ~ 8901878 (-)
AMCG00019213 NA other upstream 3323559 9251152 ~ 9434114 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 5924515 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 6485561 12413154 ~ 12423320 (-)

Expression


Co-expression Network