G31992


Basic Information

Item Value
gene id G31992
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 7224632 ~ 7224997 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40036
ccgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgac

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU40036 True 366 lncRNA 0.48 1 7224632 7224997

Neighbor

gene id symbol gene type direction distance location
AMCG00019173 cdk5,LOC106599847 coding upstream 307251 6908133 ~ 6917381 (+)
AMCG00019172 NA coding upstream 316649 6897818 ~ 6907983 (+)
AMCG00019171 NA coding upstream 392047 6823235 ~ 6832585 (+)
AMCG00019168 NA coding upstream 454415 6769243 ~ 6770217 (+)
AMCG00019167 LOC106569335 coding upstream 518740 6704357 ~ 6705892 (+)
AMCG00019178 NA coding downstream 134606 7359603 ~ 7379672 (+)
AMCG00019180 NA coding downstream 158442 7383439 ~ 7394256 (+)
AMCG00019181 gbx1 coding downstream 175258 7400255 ~ 7403144 (+)
AMCG00019187 tmub1,LOC105023792,LOC102788489 coding downstream 471856 7696853 ~ 7701770 (+)
AMCG00019190 NA coding downstream 486658 7711655 ~ 7712858 (+)
G31947 NA non-coding upstream 404597 6819765 ~ 6820035 (+)
G31930 NA non-coding upstream 532352 6691722 ~ 6692280 (+)
G31915 NA non-coding upstream 546244 6678165 ~ 6678388 (+)
G31914 NA non-coding upstream 551455 6672898 ~ 6673177 (+)
G31894 myl13,myl3,LOC107660402,LOC107567878,LOC107711693,LOC107593749 non-coding upstream 787925 6434199 ~ 6436707 (+)
G32010 agap3,LOC107383869 non-coding downstream 206683 7431680 ~ 7431944 (+)
G32048 NA non-coding downstream 395507 7620504 ~ 7620812 (+)
G32113 NA non-coding downstream 946648 8171645 ~ 8171861 (+)
G32235 NA non-coding downstream 1670242 8895239 ~ 8933746 (+)
G32268 NA non-coding downstream 1938646 9163643 ~ 9222509 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 1285035 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 2856429 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 4013742 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 4124461 3094452 ~ 3100171 (+)
AMCG00019089 NA other upstream 4606580 2520104 ~ 2618052 (+)
G32005 NA other downstream 195504 7420501 ~ 7421083 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 1120458 8345455 ~ 8384592 (+)
G32286 NA other downstream 2036377 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 2104482 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 2144901 9369898 ~ 9628662 (+)

Expression


Co-expression Network