G32048


Basic Information

Item Value
gene id G32048
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 7620504 ~ 7620812 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40100
caaacaatgtggggaagcaataaaaaaggcaaacaggatgttagggtatattgttaaaagtgtagaattgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40100 True 309 lncRNA 0.45 1 7620504 7620812

Neighbor

gene id symbol gene type direction distance location
AMCG00019181 gbx1 coding upstream 217360 7400255 ~ 7403144 (+)
AMCG00019180 NA coding upstream 226248 7383439 ~ 7394256 (+)
AMCG00019178 NA coding upstream 240832 7359603 ~ 7379672 (+)
AMCG00019173 cdk5,LOC106599847 coding upstream 703123 6908133 ~ 6917381 (+)
AMCG00019172 NA coding upstream 712521 6897818 ~ 6907983 (+)
AMCG00019187 tmub1,LOC105023792,LOC102788489 coding downstream 76041 7696853 ~ 7701770 (+)
AMCG00019190 NA coding downstream 90843 7711655 ~ 7712858 (+)
AMCG00019189 NA coding downstream 101028 7721840 ~ 7723326 (+)
AMCG00019188 cul2 coding downstream 117712 7738524 ~ 7760540 (+)
AMCG00019191 NA coding downstream 328686 7949498 ~ 7964176 (+)
G32010 agap3,LOC107383869 non-coding upstream 188560 7431680 ~ 7431944 (+)
G31992 NA non-coding upstream 395507 7224632 ~ 7224997 (+)
G31947 NA non-coding upstream 800469 6819765 ~ 6820035 (+)
G31930 NA non-coding upstream 928224 6691722 ~ 6692280 (+)
G31915 NA non-coding upstream 942116 6678165 ~ 6678388 (+)
G32113 NA non-coding downstream 550833 8171645 ~ 8171861 (+)
G32235 NA non-coding downstream 1274427 8895239 ~ 8933746 (+)
G32268 NA non-coding downstream 1542831 9163643 ~ 9222509 (+)
G32287 mpp7,LOC106578549 non-coding downstream 1687825 9308637 ~ 9324063 (+)
G32290 NA non-coding downstream 1729037 9349849 ~ 9352655 (+)
G32005 NA other upstream 199421 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 1680907 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 3252301 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 4409614 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 4520333 3094452 ~ 3100171 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 724643 8345455 ~ 8384592 (+)
G32286 NA other downstream 1640562 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 1708667 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 1749086 9369898 ~ 9628662 (+)
G32539 NA other downstream 2783827 10404639 ~ 10409497 (+)

Expression


Co-expression Network