G32113


Basic Information

Item Value
gene id G32113
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 8171645 ~ 8171861 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40173
ttaggcagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcaagcgtaaggatctgagcgactttgacaagggccaaattgtgatggctagaccactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40173 True 217 lncRNA 0.48 1 8171645 8171861

Neighbor

gene id symbol gene type direction distance location
AMCG00019193 LOC106568841 coding upstream 142918 8014532 ~ 8028727 (+)
AMCG00019192 pard3,LOC101064277,LOC106929164,LOC102309987,LOC102775598 coding upstream 187977 7983197 ~ 7983668 (+)
AMCG00019191 NA coding upstream 207469 7949498 ~ 7964176 (+)
AMCG00019188 cul2 coding upstream 411105 7738524 ~ 7760540 (+)
AMCG00019189 NA coding upstream 448319 7721840 ~ 7723326 (+)
AMCG00019194 nrp1 coding downstream 117213 8289074 ~ 8298766 (+)
AMCG00019197 NA coding downstream 137132 8308993 ~ 8322828 (+)
AMCG00019198 itgb1a,LOC107655695,LOC107653806,LOC107713907 coding downstream 165360 8337221 ~ 8346452 (+)
AMCG00019199 LOC107565694,LOC107566918 coding downstream 201939 8373800 ~ 8401893 (+)
AMCG00019196 NA coding downstream 251285 8423146 ~ 8423334 (+)
G32048 NA non-coding upstream 550833 7620504 ~ 7620812 (+)
G32010 agap3,LOC107383869 non-coding upstream 739701 7431680 ~ 7431944 (+)
G31992 NA non-coding upstream 946648 7224632 ~ 7224997 (+)
G31947 NA non-coding upstream 1351610 6819765 ~ 6820035 (+)
G31930 NA non-coding upstream 1479365 6691722 ~ 6692280 (+)
G32235 NA non-coding downstream 723378 8895239 ~ 8933746 (+)
G32268 NA non-coding downstream 991782 9163643 ~ 9222509 (+)
G32287 mpp7,LOC106578549 non-coding downstream 1136776 9308637 ~ 9324063 (+)
G32290 NA non-coding downstream 1177988 9349849 ~ 9352655 (+)
G32321 LOC103376870 non-coding downstream 1521408 9693269 ~ 9750270 (+)
G32005 NA other upstream 750562 7420501 ~ 7421083 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other upstream 2232048 5930704 ~ 5939597 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other upstream 3803442 4319596 ~ 4368203 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other upstream 4960755 3190612 ~ 3210890 (+)
AMCG00019096 LOC107727496 other upstream 5071474 3094452 ~ 3100171 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other downstream 173594 8345455 ~ 8384592 (+)
G32286 NA other downstream 1089513 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other downstream 1157618 9329479 ~ 9348819 (+)
G32293 armc4 other downstream 1198037 9369898 ~ 9628662 (+)
G32539 NA other downstream 2232778 10404639 ~ 10409497 (+)

Expression


Co-expression Network