G32144


Basic Information

Item Value
gene id G32144
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 8338036 ~ 8375404 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40245
CCGGCTCCAACACTGCTTTCAGACATTGGTGTCCATCCACGCACAGAAGTTTGAGTATCTTGGtgtaaacacacaataaattaaCAGGATTATCAGGATTGATCGATGAGGCTTTGTGCAATTTACTGAGCCTAGACGCATACCCCTTCAAACACGGAAGCCATCACCTTGTAAACATTCGGGAATGCAGAGGAAGTGCGCAAGTGAAATCTGCAGATGTTATAACCTGGATTGTTTTGGGAAGAATCTTATACCAAGACAAAATACATCTGGAGCCGCTCCACGAGCAACATATTCAGCTAATATTTCAGGAATCCGATAATCTTTCATTATAGGATTAATTACCAGATCGTAAGTTCAAAGACATCTTCTGAGGCTGAATCTGAGTGATATCCtctggtttcattttttctgaAGTGTCCTTCCTGTTGGTCACTGGCTTGTTGACGAGCACCGTCTGGCTGCCCCGGGGGTTCTCGATTAAGTCGTGCGGACAGCGCTTCTTCAGGGACTCCAGTTCATCACATCTGGCAGAGGTCGGCTCTCCTCGTCTTAAAAAGTGGGGTTTGGTGCACCATCCACATTTTTCTCCAACTTGAATACACTCCCCACAAGACTTTGCTCTTGCCATTATACATTCATTTCCTTCTTGTCCAGCATTGCTGTAATACAAGCATCCTAATAATGTTGATATAAAAAGTAGGTTTAGG
>TU40246
cGGGTCGTAAGTTCAAAGACATCTTCTGAGGCTGAATCTGAGTGATATCCTCTGGTTTCATTTTCTCAGAGGTCTCCTTCCTGTTGGTCACTGGCTTGTTGACGAGCACCGTCTGGCTGCCCCGGGGGTTCTCGATTAAGTCGTGCGGACAGCGCTTCTTCAGGGACTCCAGTTCATCGCATCTGGCAGAGGTCGGCTCTCCTCGTCTTAAAAAGTGGGGTTTGGTGCACCATCCACATTTTTCTCCAACTTGAATACACTCCCCACAAGACTTTGCTCTTGCCATTATACATTCATTTCCTTCTGTAAGAATACAAGAAAACATGTGACATGTGTGAAACAGATCCATTAAGTTGTGACCTGatgaagcattacaaaaaatctGAGGGTAAATGGGCAAAGGCAAAGTGCCTTTGTCGGGGCACACGGGGTGTGGCAGTAGATGCCAGGTGTGCCGGTTTTAGGGTGTCAAGAACTGCAACGCTGCTGAGTTTTTCATGCTCAGCAGTTTCCCGTCTGTATCAGGGATGGTCCACCACCCAAATGACATCCAGCCAACGGCAGGCCAGTGGTCGAAAACAGCTCATCCACTACCAACCATCTTGACACAACTGTGGGAAGCATTGGAGTCAACATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40245 True 710 lncRNA 0.44 4 8338036 8375404
TU40246 False 639 lncRNA 0.49 2 8338289 8339693

Neighbor

gene id symbol gene type direction distance location
AMCG00019186 NA coding downstream 730661 7599869 ~ 7607375 (-)
AMCG00019184 agap3,LOC107383869,LOC102197517 coding downstream 838493 7480093 ~ 7499543 (-)
AMCG00019185 NA coding downstream 867773 7445886 ~ 7470263 (-)
AMCG00019182 agap3 coding downstream 904398 7431674 ~ 7433638 (-)
AMCG00019183 agap3,LOC107690985,LOC107555304,LOC101174700 coding downstream 915714 7420743 ~ 7422322 (-)
AMCG00019204 NA coding upstream 251610 8627014 ~ 8636548 (-)
AMCG00019203 NA coding upstream 261146 8636550 ~ 8662947 (-)
AMCG00019207 NA coding upstream 593482 8968886 ~ 8984696 (-)
AMCG00019208 NA coding upstream 658387 9033791 ~ 9044972 (-)
AMCG00019210 bambi,LOC106578551,LOC106590018 coding upstream 833936 9209340 ~ 9214704 (-)
G32096 NA non-coding downstream 365811 7971193 ~ 7972225 (-)
G32076 cul2 non-coding downstream 579809 7755253 ~ 7758227 (-)
G32061 NA non-coding downstream 634960 7702842 ~ 7703076 (-)
G32057 NA non-coding downstream 650867 7673755 ~ 7687169 (-)
G32037 NA non-coding downstream 918183 7416085 ~ 7419853 (-)
G32351 NA non-coding upstream 974445 9349849 ~ 9352652 (-)
G32586 NA non-coding upstream 2592725 10968129 ~ 10968403 (-)
G32587 NA non-coding upstream 2593113 10968517 ~ 10968773 (-)
G32635 NA non-coding upstream 2743304 11118708 ~ 11119507 (-)
G32693 NA non-coding upstream 3221412 11596816 ~ 11600671 (-)
AMCG00019165 NA other downstream 1653735 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 3351652 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 3397369 4932349 ~ 4940667 (-)
AMCG00019109 NA other downstream 4108045 4220443 ~ 4229991 (-)
G31130 NA other downstream 6159386 2177980 ~ 2178650 (-)
AMCG00019209 LOC106600477 other upstream 471747 8847151 ~ 8901878 (-)
AMCG00019213 NA other upstream 875748 9251152 ~ 9434114 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 3476704 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 4037750 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 4793032 13168436 ~ 13188292 (-)

Expression


Co-expression Network