G32325


Basic Information

Item Value
gene id G32325
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9719039 ~ 9726753 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40482
cacacacaaactgcttACCCAGATTGCAAGTTTAGCCTTGTTCCCATCCACTGCAATAGTTTTTACTTTAAAGTCAACACCTAAATGCACAGTGAAACAAATGTAGTGGAATTAATATCAACATTTTTACAAGTGTGGAATTAatatcaacattttacaagtgtgAAAGTCTGTTCTggaaattggaaaaaaacattttaaagattaattgatGAAACTTAAAGGAAAAGTATACAATCCCCATCTATAACTGTATTGCTAAATTCCAGATAAGCAAGATTACAAtcaagagggaaaaaaaaaaaaggttttaattccACCACTCAAAGAATTAAAAACGTAAAAACTCCTCTCAACACATGAAAATGTTGGAAGACATCTTATCcatgattttaaacatgtattgaaAGAAATTGTCAGTAATACTTAAATCAAATTTGGGATGTTTTGACATCTCTATCAAATTTCAACCataatgaaaacagaagtgGGACGGGTTGTTTAAGCTTAGCGGGATCCCACCTCCCTGACCTTGAACACTGTCAATCTTCATACAAGCAGCCGTAACAGAGCCTTTATTGTATAAACAAGCTTTTCGACATTTGTCCGTACCGTACACAAATTAATCTAGACGTGGCAAGATATACAAAACACGAGAGGTTTTTTTCAGCAGGCTATTTTACGAAATGTACATTCAGTAGCATACatctgtacaaaatataaaaaggtaaATCAATGACAGCTCTCTCAAACCACCAAGGCATTTTGCTTTAGGAACCTGAAAGTACACCATAGAGCCAAACAGACTCACAAATGGGTAAGCTGGCTGTCCAAATGTATCACACGTACAGGGCGAACACAATTGAAggtattggttttatttgtagaACATACAGCACAATTCCTGAtctaaatagtttattttaaaagttacaaTTTGACTATACTGACTTTATTTCACTGCATCTAATGACCTGCTGTTGCTTTCAAACTATTTCACTTatgtaaaaaatttaaaaacatgccaAGAGctcacaaaatattttgaacattATTCTGTTGACTGTAAAGCTGTaataattttttgtttaatgtatatttagcTACTCCTTCACTATACTCTTGTTAGCATTGCTTGTTGTAATGACAATTTTTTGGCATTCTTTTTAATTGCCTGAGTTCAGGATATCTAATTctatgttattgtttgttttttaaagggcaATTGGCAAGCATTCAAAGTGTGCATATGATTTGACCAATTTAGTTTCATGTAGGGGTATTATCCCTTTAAAAGACTCCAGGGATATTAACTCCACTTAATACTGTACTGCTACAAAACATAGAAAGAGGATGAATGTCTTAGTGGCTCAGCAGACAGCCTGTGGAAGAAACACACAGCCCGTTCCTTTGATGCTGGGTCTGGTCCAGCCACACTCGTGACAGAATTCAAACAGCTGATGTAAAATATAAAGGAAACTTTGTGAAAGCAGTGCCAACTTTACAAAggtggatttgttttcattttccaaaggACAAAATCTGCTTGCCTAACTgccataaaacaacaaacacaaaaagtagtttcttttgtttttaatgtggcaAGGAAATGACTGCTGCTAATGGCTGGGAGAATATTATCACTGGCAGGACGTTCACTGGGttgtatttcttcttttgtttttataccacCTTCTCGTTCTGATTAATCCAAAAGTGAAATGAAACTGTTTGAACAgatatttccaaattatttaatttaatgttttctgttttatgcaGTACATCTTACCCCAtccaggaaagaaaaataacaacttgcCTAACTGGCAGTCAGATGATATTGTAAGTCGTGATATGAGGAGTTCTGGCTGAAGGAAGGAAACTCTTATCGTTTTAACATACTGAAGCACCCTCAGGGGCACAGCAGCATCTGTTTGGTTAGAAATACATAGATAGCCATACACAATGCCACAATATGGCGCCCTattaaacaattcaaaatatgtctTATTCACTTGGCTTCCTAGTGTTAGATAGGCCACACATTAGAGTAAAGTTACaaatttatttatgcattgtcagacacctttatccaagtTGACTTGCAAGATTTCCAATGAAATCAATGTAACTGATATATAATAGTATGTGTTGATCTTAACACTGTATCACACATGGAATTAcacactgtatgttttttttttacattgaacaGTTATGGGATTTGACACCGAGACTGGTAAAAAAAAGTCCAGTTCTGCTGGATCCCACAGCAAGTGTTTAAGTCTGtgataataagaaaataaataataataataataataataataataataataataaataataatgtgaagaTTTCAAATGAATTAATGTTAAAAGTTCCTAAACCTTTGGAATCAAACCTCTggggtgaaaaagaaaaacaacgcaaaacatttatttcataacTGCTCTGTATAAAGTCAGAGGGATACGATTCAATCACGATGCTGGAGGCTGTTTATTAGGAGAGGTACTGGGCCAAACCAGGATGCAAGTCCCAGAGGTACAGAGCGGGCTGCTCGGGCCTTGCCCAGCCACAGTCTTCCCCAAGCTGCTTCCTCAGACACCTAGAGCACAGCACGGTGTGAATACCTCACATTGCTTAAGGCCaataccccccctcccctcctctgtGCGTCGCACTGCCCATTTCCACCTGTAACCCAtatgtgagagagtgagacagagggaACGCAGAGCTCAGCCAAGAGCAGAGCATTTTACACCTGCACTGGCATGGTTTTACTGGATGACGTCATAAGGTGCAATCCAAACAGCCCCAATCAGGCAGAAAACATCATTGTGCTGGTCATTTCACTCATGCAAAgcactataaaataaacagtggtaAAACTGAGGTGATTAATATatgctgtatttatataaagGAGTCATTTGACAACGGTTAAGCCTATACCAAGATGTCCAATCTAGCAAGGTGGCTAATTAatgactgaataaatacattgaatatgtAGGTTTAAGTTGGTTTATACCAACTAAGAAAACAGTCTTggttaaaattttatttttcttaagaaaaCTTTGCAACTCTCTTTGCTGAAGACATCCctgataaataaacacagacacagaccttctctgatgtgatgtgatgacaGGACTCATTTAAACTTACCAATAGTTGCTGCAAGTTCTGGATCAAACGTATCATCTGTGAATCTTAGGAGaagacTGACTTCCCCACGCCGCTCTCTCCGATTATCAGTATCTTCAGAGTGGTTAGCACGTCGTCGTCCATGTTTCCCAGTGGTGTCTGTGTTTTGGGAAGCTGTCACTTGACAGAGGCGAGGCTGACGTTGCTGTTTCGCGGATCACAAGGCCCTGCGCTCAGTGGAGAGCTGCTCGCTTCTGCAGCAACTTCCTATTGGAGAGGTGACGTGGTGTCGTCAGTGCGCCTTTCAGCACAGAGCGGCGGTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40482 True 3495 lncRNA 0.38 2 9719039 9726753

Neighbor

gene id symbol gene type direction distance location
AMCG00019219 mkx,LOC107665863,LOC103377095,LOC106578547 coding upstream 4418 9677660 ~ 9714621 (+)
AMCG00019218 armc4 coding upstream 55153 9654326 ~ 9663886 (+)
AMCG00019217 armc4 coding upstream 90381 9626410 ~ 9628658 (+)
AMCG00019212 wu:fc01d11,LOC107657783,LOC107554911,LOC107732095 coding upstream 304853 9407301 ~ 9414186 (+)
AMCG00019214 NA coding upstream 342294 9357098 ~ 9376745 (+)
AMCG00019227 NA coding downstream 5437 9732190 ~ 9745637 (+)
AMCG00019222 NA coding downstream 61608 9788361 ~ 9792594 (+)
AMCG00019221 LOC107687524 coding downstream 86637 9813390 ~ 9824416 (+)
AMCG00019237 abi1a coding downstream 146832 9873585 ~ 9884570 (+)
AMCG00019236 NA coding downstream 167108 9893861 ~ 9905733 (+)
G32324 NA non-coding upstream 475 9718022 ~ 9718564 (+)
G32290 NA non-coding upstream 366384 9349849 ~ 9352655 (+)
G32287 mpp7,LOC106578549 non-coding upstream 394976 9308637 ~ 9324063 (+)
G32268 NA non-coding upstream 496530 9163643 ~ 9222509 (+)
G32235 NA non-coding upstream 785293 8895239 ~ 8933746 (+)
G32418 NA non-coding downstream 83131 9809884 ~ 9812637 (+)
G32437 apbb1ip non-coding downstream 190567 9917320 ~ 9920036 (+)
G32490 NA non-coding downstream 382153 10108906 ~ 10109150 (+)
G32549 LOC103376870 non-coding downstream 736410 10463163 ~ 10508063 (+)
G32671 NA non-coding downstream 1651203 11377956 ~ 11448251 (+)
G32293 armc4 other upstream 90377 9369898 ~ 9628662 (+)
G32286 NA other upstream 179828 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 370220 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 1334447 8345455 ~ 8384592 (+)
G32005 NA other upstream 2297956 7420501 ~ 7421083 (+)
G32539 NA other downstream 677886 10404639 ~ 10409497 (+)
G33159 LOC103376870 other downstream 4712500 14439253 ~ 14486706 (+)
G33283 NA other downstream 5437595 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 5828066 15554819 ~ 15626955 (+)
G33406 NA other downstream 6317189 16043942 ~ 16081943 (+)

Expression


Co-expression Network