G32351


Basic Information

Item Value
gene id G32351
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 9349849 ~ 9352652 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40510
TACTTTCgtttcaaatacagaaaatgggTATTAAGAAGGATAACATTTGCTGTTTGCATCACTGAAGAAAAAGTATATTAGGAAAAATTCTACTGCAAATGTTGCTTTTGGAGAGaaagacaaattgttttaaaaagtaggCTGATGTCGGAGTTTTAATGGattaatcaaaactttaaaaacatggcaGTATAAGAAAAAACCTTtcataattcaaatataatgcaAAAGGGATTTAGATCTTGTTTTTGgtaagtcatttaaaaacaaaatgcattgacAAAAGGGACCAATCCTTGCTCTGGACATGTATCTAATGTACaacactaattaaaaaatattgtataattttaaggactattaaaatacaattacagtgcTGCTGGTGACCAAACCGGCACATTGCGAGGTAAATATTTACATGGAATGTTGAGCATGATTGTTCAAAGCCAAAATTTAGAAACTAGAACAGACGCTTCTAAAAATACACAGCGGAGAGATTTCACTTTCCCTGCCACGTCCTTTCATAAATAGTTGCACTAAAATTCTTCACATCTAGGTGCCACAGATATGTTGTAAAGATATAAGCTCAAGCACGAAGTGAACTCAACAACACCTCTAAGTAACAAGCAACACttacatacaaaaattaaaaataaaaataaacgcaAACCCTGATAACTGAGAAGTAGCAATTTAACATTTGCTTCAGTAGTAAATCTGGAAATGTTTAGAACCTTCTGTTAAATTCCTTGTTTTAGACCATTTTACGAGAATAAATGCAAGTAAACTCCACCCTAATTATACAAGATTGAGAACATTTCTTGTATCTGGGAGCCAAAGTCTGGTAACTTTTAGAGGCAAACTGTTATATCGGGCACCTTCATAAGAAGGGTGGAGGTTTTAAAATAGCTTCTGAATGAATTACAACTTGAAAAACAGAACTAAATGGCATTTTAAGAAACCAGTGTGGGGGTCATGTTGattattgaatttgtaaaatggtaacttagtttatttaaaatattaccacTGACACAGAGGATTTCCAAAACACTCCAGAAAAGATGATGGGAAATATGTACATGAAGAATATGTAAAACAGCAgattctaaaaaatatattaatttataacaaATACAGTTATGTCTTTGCTTTATTGAATGCACATGTGCAAATTCTATTGACATCCAGGGTAGAATCTGTTTGAAATTAGTTAAAACTGTAACCTTAAGACTGCAAAGACAAACACTTTTATCTTTGCTTCCATGTCCtatacaaacatttacatataaacCTTCCTtccaaagaaatataataaaaatagtaatccCTTTGGTTTCTATAAactaatgttaaaaatacactaagACACATGTCCATCCTGGCACACGGCTGGTTGGCAGTCAGACTGGCGAGGAATCCTAATTGACAACGCATCAGTAAGctatgtacatatttaaatagaaatccAGTGTCAGGAACAGAATTCAGGAAAAAATACTCAACTATCCCTGTGAAGATGACCGACCCTGCGAGGGAGATACTTGGATGTTGGTGAGCTGTATAAAAATGTTAGACAAAAGTGAAATGCTTCATGCTTTTGCAGGAATTGCATTTAAAAGTCCTTCCCTttcttgtgtgtatatatatatttctatattagGAGTGTGTCCAATTCACAGGAACCCAGAGAGTCTCTGTCTCCAGCTTTTTCAACGTCATCTTCAACTCGCTGAAAGCAGTCATAA

Function

GO:

id name namespace
GO:0042692 muscle cell differentiation biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0055004 atrial cardiac myofibril assembly biological_process
GO:0055014 atrial cardiac muscle cell development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40510 True 1751 lncRNA 0.34 2 9349849 9352652

Neighbor

gene id symbol gene type direction distance location
AMCG00019211 wac coding downstream 99523 9223290 ~ 9250326 (-)
AMCG00019210 bambi,LOC106578551,LOC106590018 coding downstream 135145 9209340 ~ 9214704 (-)
AMCG00019208 NA coding downstream 304877 9033791 ~ 9044972 (-)
AMCG00019207 NA coding downstream 365153 8968886 ~ 8984696 (-)
AMCG00019203 NA coding downstream 686902 8636550 ~ 8662947 (-)
AMCG00019216 NA coding upstream 142730 9495382 ~ 9549803 (-)
AMCG00019220 rab18,LOC106578546,LOC107566717,LOC106590026,LOC107708473,LOC107681801 coding upstream 361780 9714432 ~ 9726715 (-)
AMCG00019224 LOC106590299 coding upstream 383615 9736267 ~ 9747253 (-)
AMCG00019226 NA coding upstream 409070 9761722 ~ 9789110 (-)
AMCG00019225 NA coding upstream 448400 9801052 ~ 9812613 (-)
G32144 NA non-coding downstream 974445 8338036 ~ 8375404 (-)
G32096 NA non-coding downstream 1377624 7971193 ~ 7972225 (-)
G32076 cul2 non-coding downstream 1591622 7755253 ~ 7758227 (-)
G32061 NA non-coding downstream 1646773 7702842 ~ 7703076 (-)
G32057 NA non-coding downstream 1662680 7673755 ~ 7687169 (-)
G32586 NA non-coding upstream 1615477 10968129 ~ 10968403 (-)
G32587 NA non-coding upstream 1615865 10968517 ~ 10968773 (-)
G32635 NA non-coding upstream 1766056 11118708 ~ 11119507 (-)
G32693 NA non-coding upstream 2244164 11596816 ~ 11600671 (-)
G32706 NA non-coding upstream 2280857 11633509 ~ 11636317 (-)
AMCG00019209 LOC106600477 other downstream 447971 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 2665548 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 4363465 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 4409182 4932349 ~ 4940667 (-)
AMCG00019109 NA other downstream 5119858 4220443 ~ 4229991 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 2499456 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 3060502 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 3815784 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 4309464 13662116 ~ 13665230 (-)
G33163 NA other upstream 5139239 14491891 ~ 14558290 (-)

Expression


Co-expression Network