G32587


Basic Information

Item Value
gene id G32587
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 10968517 ~ 10968773 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40817
ATTCTGTTTTCCATCACTATAGCACATGTATATTCATTTatgacatttctgaaatacTGTACTCCGGCTATAAAACCTCTATGTACTGACCTACACAACTTACAGCACACTAAGCAGGGAAGTTTGAAGTGTCTGCAGATACCTGGTGATACTTTCTATGTTAAATTTGTGTAGATATTAACAAGACTTGTATATGTACAGGCTATGTTTACTTAGGTAATATAAGGTCAATGGTGcagttgcatttttaatttgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40817 True 257 lncRNA 0.34 1 10968517 10968773

Neighbor

gene id symbol gene type direction distance location
AMCG00019250 NA coding downstream 190100 10757686 ~ 10778417 (-)
AMCG00019249 dlgap1,LOC107751362,LOC107584464,LOC107686064 coding downstream 242359 10710460 ~ 10726158 (-)
AMCG00019246 ptf1a,LOC107686074,LOC106569290,LOC107664050,LOC107751373,LOC107732570 coding downstream 281252 10686230 ~ 10687265 (-)
AMCG00019247 otud1,LOC102783317,LOC106930095,LOC106960099 coding downstream 322525 10644826 ~ 10645992 (-)
AMCG00019244 NA coding downstream 476707 10478366 ~ 10491810 (-)
AMCG00019251 NA coding upstream 1416 10970189 ~ 10971265 (-)
AMCG00019252 NA coding upstream 8015 10976788 ~ 11019903 (-)
AMCG00019253 NA coding upstream 133199 11101972 ~ 11102847 (-)
AMCG00019257 NA coding upstream 151454 11120227 ~ 11125717 (-)
AMCG00019258 NA coding upstream 208930 11177703 ~ 11195791 (-)
G32586 NA non-coding downstream 114 10968129 ~ 10968403 (-)
G32351 NA non-coding downstream 1615865 9349849 ~ 9352652 (-)
G32144 NA non-coding downstream 2593113 8338036 ~ 8375404 (-)
G32096 NA non-coding downstream 2996292 7971193 ~ 7972225 (-)
G32076 cul2 non-coding downstream 3210290 7755253 ~ 7758227 (-)
G32635 NA non-coding upstream 149935 11118708 ~ 11119507 (-)
G32693 NA non-coding upstream 628043 11596816 ~ 11600671 (-)
G32706 NA non-coding upstream 664736 11633509 ~ 11636317 (-)
G32773 NA non-coding upstream 961731 11930504 ~ 11979273 (-)
G32779 NA non-coding upstream 1032177 12000950 ~ 12001165 (-)
AMCG00019213 NA other downstream 1534403 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 2066639 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 4284216 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 5982133 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 6027850 4932349 ~ 4940667 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 883335 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 1444381 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 2199663 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 2693343 13662116 ~ 13665230 (-)
G33163 NA other upstream 3523118 14491891 ~ 14558290 (-)

Expression


Co-expression Network