Gene
RNA
| Item | Value |
|---|---|
| gene id | G32674 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 11632358 ~ 11637880 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU40936 | True | 477 | lncRNA | 0.29 | 2 | 11632358 | 11637880 |
| TU40937 | False | 475 | lncRNA | 0.30 | 2 | 11632358 | 11637880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019265 | NA | coding | upstream | 20283 | 11607016 ~ 11612075 (+) |
| AMCG00019263 | LOC108432749 | coding | upstream | 32545 | 11585793 ~ 11599813 (+) |
| AMCG00019264 | LOC108432749,LOC108271270,LOC106579657,LOC106590348 | coding | upstream | 64961 | 11554220 ~ 11567397 (+) |
| AMCG00019262 | LOC106929367 | coding | upstream | 96987 | 11525199 ~ 11535371 (+) |
| AMCG00019261 | NA | coding | upstream | 155070 | 11472122 ~ 11477288 (+) |
| AMCG00019267 | NA | coding | downstream | 2628 | 11640508 ~ 11648448 (+) |
| AMCG00019260 | NA | coding | downstream | 32015 | 11669895 ~ 11697021 (+) |
| AMCG00019271 | ndufv2 | coding | downstream | 142521 | 11780401 ~ 11785241 (+) |
| AMCG00019269 | ankrd12 | coding | downstream | 183143 | 11821023 ~ 11838760 (+) |
| AMCG00019270 | LOC106579643,LOC108432738,LOC108271222,LOC103038715 | coding | downstream | 203263 | 11841143 ~ 11853279 (+) |
| G32671 | NA | non-coding | upstream | 184107 | 11377956 ~ 11448251 (+) |
| G32549 | LOC103376870 | non-coding | upstream | 1124295 | 10463163 ~ 10508063 (+) |
| G32490 | NA | non-coding | upstream | 1523208 | 10108906 ~ 10109150 (+) |
| G32437 | apbb1ip | non-coding | upstream | 1712322 | 9917320 ~ 9920036 (+) |
| G32418 | NA | non-coding | upstream | 1819721 | 9809884 ~ 9812637 (+) |
| G32778 | NA | non-coding | downstream | 363083 | 12000963 ~ 12001164 (+) |
| G32892 | NA | non-coding | downstream | 971521 | 12609401 ~ 12612533 (+) |
| G32893 | NA | non-coding | downstream | 975405 | 12613285 ~ 12613926 (+) |
| G33075 | LOC104962440 | non-coding | downstream | 1673534 | 13311414 ~ 13311742 (+) |
| G33093 | NA | non-coding | downstream | 1995822 | 13633702 ~ 13638171 (+) |
| G32539 | NA | other | upstream | 1222861 | 10404639 ~ 10409497 (+) |
| G32293 | armc4 | other | upstream | 2003696 | 9369898 ~ 9628662 (+) |
| G32286 | NA | other | upstream | 2093147 | 9261374 ~ 9539211 (+) |
| AMCG00019215 | mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 | other | upstream | 2283539 | 9329479 ~ 9348819 (+) |
| G32130 | itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 | other | upstream | 3247766 | 8345455 ~ 8384592 (+) |
| G33159 | LOC103376870 | other | downstream | 2801373 | 14439253 ~ 14486706 (+) |
| G33283 | NA | other | downstream | 3526468 | 15164348 ~ 15169841 (+) |
| AMCG00019345 | NA | other | downstream | 3916939 | 15554819 ~ 15626955 (+) |
| G33406 | NA | other | downstream | 4406062 | 16043942 ~ 16081943 (+) |
| AMCG00019376 | NA | other | downstream | 5811440 | 17449320 ~ 17452659 (+) |
