G32674


Basic Information

Item Value
gene id G32674
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11632358 ~ 11637880 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40936
tatatgtgtgtgtgtatatatatatatatatagacatgcaTAGATATGTTATATTAATGTAATCACATGCACATACCAAATGTGTACTGTATGTGAAGCAATAGTCTCcattgtggaaaataaaataaattctgcagTGTATAAGTACGGagagcacacagcacagtgcttTAGTATAACCTgtctttaaatttgaaaaagCCAATGTGTACAATTTTCATgtgatgcatacattttaaaggtaaGCTTTTAGTTATCCCTTCCCGTTTTAAAATGACcttttgttgcatttaaaacCATTCTTTTCATAAATATAGCAAGCTGCGAGCTGTACATTGAGATacttaacatttaaattctGGTACAGCaagttttatgtatttgaataagTTGGCATGTTCtaagacttatttttttgtggtaTTTATAACTTGTGGCATTCTTTAACTAATGAAGTGCAAAtaaaattttatattt
>TU40937
tatatgtgtgtgtgtgtgtgtatatatatagacatgcaTAGATATGTTATATTAATGTAATCACATGCACATACCAAATGTGTACTGTATGTGAAGCAATAGTCTCcattgtggaaaataaaataaattctgcagTGTATAAGTACGGagagcacacagcacagtgcttTAGTATAACCTgtctttaaatttgaaaaagCCAATGTGTACAATTTTCATgtgatgcatacattttaaaggtaaGCTTTTAGTTATCCCTTCCCGTTTTAAAATGACcttttgttgcatttaaaacCATTCTTTTCATAAATATAGCAAGCTGCGAGCTGTACATTGAGATacttaacatttaaattctGGTACAGCaagttttatgtatttgaataagTTGGCATGTTCtaagacttatttttttgtggtaTTTATAACTTGTGGCATTCTTTAACTAATGAAGTGCAAAtaaaattttatattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40936 True 477 lncRNA 0.29 2 11632358 11637880
TU40937 False 475 lncRNA 0.30 2 11632358 11637880

Neighbor

gene id symbol gene type direction distance location
AMCG00019265 NA coding upstream 20283 11607016 ~ 11612075 (+)
AMCG00019263 LOC108432749 coding upstream 32545 11585793 ~ 11599813 (+)
AMCG00019264 LOC108432749,LOC108271270,LOC106579657,LOC106590348 coding upstream 64961 11554220 ~ 11567397 (+)
AMCG00019262 LOC106929367 coding upstream 96987 11525199 ~ 11535371 (+)
AMCG00019261 NA coding upstream 155070 11472122 ~ 11477288 (+)
AMCG00019267 NA coding downstream 2628 11640508 ~ 11648448 (+)
AMCG00019260 NA coding downstream 32015 11669895 ~ 11697021 (+)
AMCG00019271 ndufv2 coding downstream 142521 11780401 ~ 11785241 (+)
AMCG00019269 ankrd12 coding downstream 183143 11821023 ~ 11838760 (+)
AMCG00019270 LOC106579643,LOC108432738,LOC108271222,LOC103038715 coding downstream 203263 11841143 ~ 11853279 (+)
G32671 NA non-coding upstream 184107 11377956 ~ 11448251 (+)
G32549 LOC103376870 non-coding upstream 1124295 10463163 ~ 10508063 (+)
G32490 NA non-coding upstream 1523208 10108906 ~ 10109150 (+)
G32437 apbb1ip non-coding upstream 1712322 9917320 ~ 9920036 (+)
G32418 NA non-coding upstream 1819721 9809884 ~ 9812637 (+)
G32778 NA non-coding downstream 363083 12000963 ~ 12001164 (+)
G32892 NA non-coding downstream 971521 12609401 ~ 12612533 (+)
G32893 NA non-coding downstream 975405 12613285 ~ 12613926 (+)
G33075 LOC104962440 non-coding downstream 1673534 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 1995822 13633702 ~ 13638171 (+)
G32539 NA other upstream 1222861 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 2003696 9369898 ~ 9628662 (+)
G32286 NA other upstream 2093147 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 2283539 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 3247766 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 2801373 14439253 ~ 14486706 (+)
G33283 NA other downstream 3526468 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 3916939 15554819 ~ 15626955 (+)
G33406 NA other downstream 4406062 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 5811440 17449320 ~ 17452659 (+)

Expression


Co-expression Network