G32693


Basic Information

Item Value
gene id G32693
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11596816 ~ 11600671 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU40958
tttttaattgagcagTAAATCCATACAAGATAAACAAAAGCTAACAATATCTTCTGGTCAACATTATACTgagtttgggaaaaaaaaaaaacatgattgtcACTCACTGTGCTTCACAAAAAGTACtcttcatgaataaataatcagatgaacttaaaatatttacaatataaacaaatgaaaaaagagaaaagctttGGATCCTTTTATTTAGACTTGACGTGAGCTTGTGTGGAATGCGCCGCCACTTCCTCCCTCAACAGAACGATAATTGTAGCAACTACAGCACAACAAATTAACACTTAGGATTGCAAGTTTGATGCCAGTTTAATTCAGAAATAACTACATATATGTCATACTGCTTGGTGTTAACATAAACattaataagaaagaaaattattaaCATTACGCTATATTGCATTCCCCACAAAACGGAAATGACACTTAGCATCCAACAAGGATAAAGGCAGTAACCGAGGATCACAggcaaagaaatatatattttattttttatttttatttttttaagtctgaCAAATGAACTGTAAATACATCACTGTGCTCCATAAAAATTTCAGCTAGCTATGATGGACAGTTGATTAGATGCGTTAACGGTAACAATTGTGTCCAACCAATTCTTGCTTTACAAGTTGAGCTGTGGTAATCAGCATGGAAAATGGGCAGTGCAAGCAGACTTGATTCGATACAGTTCTTTCAGCTCTTGTTGAAACGGCCAGATATAAACAGCAGTCTAAGGTTCTACCAGTGAGCGTCCTTCAAGTGCTCAACAACAACAGGGTTATTACGACTCCGTCCAGGTATGTGTGGCAAAGTAAAGAAGAGTCTCAAGGCAAGTTATCCAGAATTCAAGTATTCCAGCGCTACTTCATAGCAGAACTTGTATTGAGTAAGTCAACCATATTGGGCTTGTTGTTCCTCAGGGTCTTTACAGCGTGGAAAACATCGACTGAGCGTTGGTGCCGGAGCATCTCGCAGACGATGCTAATTGCACAAAATGTCCCACTGCGGCCCCCGCCATTAGACAGTGCACCACGGTCCTGCCCTCTCCTCCGTCGTACTCCTCCTGCCATTTCTCCACTTGGCGAATGAGCTTCAGGAAGGAGCGCTTTGACACGGGTGTGTCCCTGTACATGGGCCACCCCAGGAACTGGAACTGCTGCACCATCCGGTACCCATCTTGAGGCTGCAGGGTGGACAGGCACACAGGACTCCTGTTACCCACAGAGCTGAAACCCCACTTACACACAAAATCTTAAAAGATCCCAGTGTTGCATGTATATATAGTCATAATGCCACAAATATCAGTGTTTGTAAATGGACCAAATTCTTTGCTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40958 True 1358 lncRNA 0.41 3 11596816 11600671

Neighbor

gene id symbol gene type direction distance location
AMCG00019256 NA coding downstream 268457 11283571 ~ 11328359 (-)
AMCG00019258 NA coding downstream 401025 11177703 ~ 11195791 (-)
AMCG00019257 NA coding downstream 471099 11120227 ~ 11125717 (-)
AMCG00019253 NA coding downstream 493969 11101972 ~ 11102847 (-)
AMCG00019252 NA coding downstream 576913 10976788 ~ 11019903 (-)
AMCG00019266 LOC106596660,LOC106569828,LOC100697261 coding upstream 157444 11758115 ~ 11774317 (-)
AMCG00019277 apcdd1,LOC107383547,LOC100712112 coding upstream 335433 11936104 ~ 11954459 (-)
AMCG00019278 NA coding upstream 451989 12052660 ~ 12053218 (-)
AMCG00019279 piezo2 coding upstream 477891 12078562 ~ 12138607 (-)
AMCG00019288 NA coding upstream 842017 12442688 ~ 12445186 (-)
G32635 NA non-coding downstream 477309 11118708 ~ 11119507 (-)
G32587 NA non-coding downstream 628043 10968517 ~ 10968773 (-)
G32586 NA non-coding downstream 628413 10968129 ~ 10968403 (-)
G32351 NA non-coding downstream 2244164 9349849 ~ 9352652 (-)
G32144 NA non-coding downstream 3221412 8338036 ~ 8375404 (-)
G32706 NA non-coding upstream 32838 11633509 ~ 11636317 (-)
G32773 NA non-coding upstream 329833 11930504 ~ 11979273 (-)
G32779 NA non-coding upstream 400279 12000950 ~ 12001165 (-)
G32784 NA non-coding upstream 458953 12059624 ~ 12060251 (-)
G32786 NA non-coding upstream 461607 12062278 ~ 12067052 (-)
AMCG00019213 NA other downstream 2162702 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 2694938 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 4912515 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 6610432 4941059 ~ 4986384 (-)
AMCG00019129 NA other downstream 6656149 4932349 ~ 4940667 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other upstream 251437 11852108 ~ 11885571 (-)
AMCG00019284 NA other upstream 812483 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 1567765 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 2061445 13662116 ~ 13665230 (-)
G33163 NA other upstream 2891220 14491891 ~ 14558290 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location