G32773



Basic Information


Item Value
gene id G32773
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11930504 ~ 11979273 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU41056
ttttttttaagaatttttttctttttttatttcttcaatgttAAATACCATGGGACAGGATTTTAAGAATGGAGAGCTTTTTTTCAGTCAACATTTGCCTCACAAAGGATATATAAtttgtggcaaaaaaaaaaaaagaataaagtcTGCGTTGGTATCAGCAGGGACaggaaaagaatgaaaaatttACAAGGAAGGAGGCACCGATTTCCCCAGCAGACCTCTTGACATTCCCAAAGAAAGGAAGAGTACGAATCGGACTAACAAATTGAATTTCAAGAGGCAATCCAGCAACAGGTAGCAAAAATTCtttttaaaaggattaaaataacatttacaagaCACTTAACATTCCATTCAACTCTTATTAAaaccacagagagaaagagagaacaatTCATTTTTTACGATTTTTTATCAAGGGCTCTATGTAGTACCTTGACACGCCTGCTATTGTTGTTTtgataatgtacattttttttttttttcaattcccCAAACCCCCCgaagaactgaaaacaaaataaaggaaaacttttcttcttttgtgtgtgtactaacCGTGTGAGAGATTGTTAAAGGCAAGGCCTGTTTATGATGCTGTACACAAACATGGTCACTGTGGGCCATACTACCAATGATATGGCAGATCAACGAAAAGACATTTCCAGGCCTAAATGAGCACGTTTGCATGCTTCTCCTCTACAAGATGAACTTCCCTAGGAAGAATCCGATGAAAATGGCTGCAATTACGacaaggagagagggaagagagttGGATCCGTTGTCTCTACCCATTAATCCTCCCGTGTTTGATACTATGTTGTCTGATCGAGCTACCTTCCTCATTCTCAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU41056 True 855 lncRNA 0.37 2 11930504 11979273

Neighbor


gene id symbol gene type direction distance location
AMCG00019266 LOC106596660,LOC106569828,LOC100697261 coding downstream 156187 11758115 ~ 11774317 (-)
AMCG00019256 NA coding downstream 602145 11283571 ~ 11328359 (-)
AMCG00019258 NA coding downstream 734713 11177703 ~ 11195791 (-)
AMCG00019257 NA coding downstream 804787 11120227 ~ 11125717 (-)
AMCG00019253 NA coding downstream 827657 11101972 ~ 11102847 (-)
AMCG00019278 NA coding upstream 73387 12052660 ~ 12053218 (-)
AMCG00019279 piezo2 coding upstream 99289 12078562 ~ 12138607 (-)
AMCG00019288 NA coding upstream 463415 12442688 ~ 12445186 (-)
AMCG00019286 usp14,LOC106569325 coding upstream 475806 12455079 ~ 12463992 (-)
AMCG00019287 rock1,LOC106569322 coding upstream 486853 12466126 ~ 12504550 (-)
G32706 NA non-coding downstream 294187 11633509 ~ 11636317 (-)
G32693 NA non-coding downstream 329833 11596816 ~ 11600671 (-)
G32635 NA non-coding downstream 810997 11118708 ~ 11119507 (-)
G32587 NA non-coding downstream 961731 10968517 ~ 10968773 (-)
G32586 NA non-coding downstream 962101 10968129 ~ 10968403 (-)
G32779 NA non-coding upstream 21677 12000950 ~ 12001165 (-)
G32784 NA non-coding upstream 80351 12059624 ~ 12060251 (-)
G32786 NA non-coding upstream 83005 12062278 ~ 12067052 (-)
G32825 NA non-coding upstream 387513 12366786 ~ 12367226 (-)
G32844 NA non-coding upstream 473324 12452597 ~ 12453627 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 44933 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 2496390 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 3028626 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 5246203 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 6944120 4941059 ~ 4986384 (-)
AMCG00019284 NA other upstream 433881 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 1189163 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 1682843 13662116 ~ 13665230 (-)
G33163 NA other upstream 2512618 14491891 ~ 14558290 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 2972569 14951842 ~ 14991996 (-)

Expression



Co-expression Network