Gene
RNA
| Item | Value |
|---|---|
| gene id | G32778 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 12000963 ~ 12001164 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU41061 | True | 202 | lncRNA | 0.49 | 1 | 12000963 | 12001164 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019274 | vapa,LOC102777368 | coding | upstream | 70280 | 11924765 ~ 11930683 (+) |
| AMCG00019273 | LOC107750901 | coding | upstream | 99887 | 11888005 ~ 11901076 (+) |
| AMCG00019268 | ralbp1,LOC107667860 | coding | upstream | 133953 | 11860876 ~ 11867010 (+) |
| AMCG00019270 | LOC106579643,LOC108432738,LOC108271222,LOC103038715 | coding | upstream | 147684 | 11841143 ~ 11853279 (+) |
| AMCG00019269 | ankrd12 | coding | upstream | 162203 | 11821023 ~ 11838760 (+) |
| AMCG00019275 | napg,LOC108271818,LOC106590336,LOC108431250 | coding | downstream | 61258 | 12062422 ~ 12067044 (+) |
| AMCG00019276 | NA | coding | downstream | 66437 | 12067601 ~ 12075103 (+) |
| AMCG00019285 | NA | coding | downstream | 285754 | 12286918 ~ 12287709 (+) |
| AMCG00019281 | gnal,LOC107554377,LOC107732066,LOC107667176,LOC106520735 | coding | downstream | 323107 | 12324271 ~ 12325838 (+) |
| AMCG00019282 | gnal,LOC103396682,LOC106520735 | coding | downstream | 406214 | 12407378 ~ 12412273 (+) |
| G32674 | NA | non-coding | upstream | 363083 | 11632358 ~ 11637880 (+) |
| G32671 | NA | non-coding | upstream | 552712 | 11377956 ~ 11448251 (+) |
| G32549 | LOC103376870 | non-coding | upstream | 1492900 | 10463163 ~ 10508063 (+) |
| G32490 | NA | non-coding | upstream | 1891813 | 10108906 ~ 10109150 (+) |
| G32437 | apbb1ip | non-coding | upstream | 2080927 | 9917320 ~ 9920036 (+) |
| G32892 | NA | non-coding | downstream | 608237 | 12609401 ~ 12612533 (+) |
| G32893 | NA | non-coding | downstream | 612121 | 12613285 ~ 12613926 (+) |
| G33075 | LOC104962440 | non-coding | downstream | 1310250 | 13311414 ~ 13311742 (+) |
| G33093 | NA | non-coding | downstream | 1632538 | 13633702 ~ 13638171 (+) |
| G33141 | cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 | non-coding | downstream | 2151638 | 14152802 ~ 14160703 (+) |
| G32539 | NA | other | upstream | 1591466 | 10404639 ~ 10409497 (+) |
| G32293 | armc4 | other | upstream | 2372301 | 9369898 ~ 9628662 (+) |
| G32286 | NA | other | upstream | 2461752 | 9261374 ~ 9539211 (+) |
| AMCG00019215 | mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 | other | upstream | 2652144 | 9329479 ~ 9348819 (+) |
| G32130 | itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 | other | upstream | 3616371 | 8345455 ~ 8384592 (+) |
| G33159 | LOC103376870 | other | downstream | 2438089 | 14439253 ~ 14486706 (+) |
| G33283 | NA | other | downstream | 3163184 | 15164348 ~ 15169841 (+) |
| AMCG00019345 | NA | other | downstream | 3553655 | 15554819 ~ 15626955 (+) |
| G33406 | NA | other | downstream | 4042778 | 16043942 ~ 16081943 (+) |
| AMCG00019376 | NA | other | downstream | 5448156 | 17449320 ~ 17452659 (+) |
