G32786


Basic Information

Item Value
gene id G32786
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12062278 ~ 12067052 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41072
CATTTTGtatcatattgtttattgtcaCAGGGAGGAATAATCTTGTATATAGCCCTGTATTTTGCTAACCAgtttatacattgttttcatttaatgcaCTGCTTTTACACATCACAgaatattttggaaaacaattcCTCAAAGCAACAATTTGCCATAATTTGCATACAATAAGATGCAACTAAAGACATTTACACATCACAGCAGATTGCATTTGATTAGTACAGTTCTCACACTGAGACTGAAGGTGAGGGGGGAGGGAACAAAATGATCACTTCCGTACAAGTTTTACAGATGAATATATCTATAGAACAGCTTTCATTACTTAAAGACATTAAGAACATCAGAACCAGCCAATATAAATCATTATAACATCCTTATATTGAAcatctatacaaatatattaggAAATCTGAATATAAGGAaccacatacaaaaaaagaacactACTTTAACAATGTcaataaattgaaaattgtattttttcacagaacAGTCACCCTTATATTTATTGCTGTGCTTATGTTAATAgttattccatttttttttttttattattcaaggAATGCCATATAGGGGTACACACTACTTACCAATTGttgtttcagtttctttgaAAGCACATACTTCAAACATTGAATTCCATAATCTAGCTGCCAATGGCCCCTTTACCAACTGCAAgtgtttaaacattattttattaaggctGAATCAATCCATCAATCCATCCACATGTAGTACCATTAGATCACTATCAATGGTTACAATTGTGAATGGATTTATCACTTTTGTGGTGCTGAAAGGTTTTCTAAGTATGCAAACTGAGCACACTTCAAAGCAAACAGCTTGCACGGGTACCTTCAATTAggattgcttttctttttgttcatttgtttaccCTTTCCATAAGTTCCATAAATTAATGCTTACCCGAGTGGTACACAGCCAAGAACACAGAGAGATTGTATGATGAAAAAGTGCTTCTTGCTATGGTCTTCACACTGGTAAGAAATGTGTTGGTTCTCTTTTTCACTGGCAGCTCCTAGCAAAAACATTTGCTGATCAACATTTACCACAGCCAAGCTACTCACGCACAGGGCAAGCAACACAAAGGTTAGGGGAATTGACATTGatacaaaatttaaatgaaagcaaGAGATAACATTTGCTGATAGGAAGTGAATTTTTGGAAAACGAGAAACTCCCATAAAGATTCTAATTTAACAGGCATTGATATCATATTAATCTGGCCTCCCATTGTTAACGGTTCTGGGTaccacagcaaaacaaatatttacttattttacaatGGGGAAACTAAAAGAGTTTTTCAAGCTTTCGTTCCCTTCATATTAGATACGGCGATATATATACCTTCATTCAAGGTAGACACAGTCATGTTAGCTAGACCAAATAACTTCTGACTCCTAGGGGCTTGCTACCTCCATGTTTCTCTAGATCACTTATAGAAATACATTGTCTTggtttaataatacatgtataagtTGTTTGATTTTCCACTTAAGTGGTGTTAGATCTGTACCAGCCCGATTCTTTGTCATGTATTGTTTGTaatctgcaaatattttaatactgtggacctttttgttttccacaacaCAACTGAAATCTTCCATAAAGTTGCACAGTCAGAAATCTCAGTATGGATGTGCTTACACAATCTTTCTTCCTCTGTTTCAGTTATGGAGATATAAGCTGCGAATAAAAACTGCActgcaactgaaataaataacactaaaataataaattcataatgtacaaaaaaaaaatatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41072 True 1805 lncRNA 0.34 2 12062278 12067052

Neighbor

gene id symbol gene type direction distance location
AMCG00019278 NA coding downstream 9060 12052660 ~ 12053218 (-)
AMCG00019277 apcdd1,LOC107383547,LOC100712112 coding downstream 107819 11936104 ~ 11954459 (-)
AMCG00019266 LOC106596660,LOC106569828,LOC100697261 coding downstream 287961 11758115 ~ 11774317 (-)
AMCG00019256 NA coding downstream 733919 11283571 ~ 11328359 (-)
AMCG00019258 NA coding downstream 866487 11177703 ~ 11195791 (-)
AMCG00019279 piezo2 coding upstream 11510 12078562 ~ 12138607 (-)
AMCG00019288 NA coding upstream 375636 12442688 ~ 12445186 (-)
AMCG00019286 usp14,LOC106569325 coding upstream 388027 12455079 ~ 12463992 (-)
AMCG00019287 rock1,LOC106569322 coding upstream 399074 12466126 ~ 12504550 (-)
AMCG00019291 NA coding upstream 533481 12600533 ~ 12613847 (-)
G32784 NA non-coding downstream 2027 12059624 ~ 12060251 (-)
G32779 NA non-coding downstream 61113 12000950 ~ 12001165 (-)
G32773 NA non-coding downstream 83005 11930504 ~ 11979273 (-)
G32706 NA non-coding downstream 425961 11633509 ~ 11636317 (-)
G32693 NA non-coding downstream 461607 11596816 ~ 11600671 (-)
G32825 NA non-coding upstream 299734 12366786 ~ 12367226 (-)
G32844 NA non-coding upstream 385545 12452597 ~ 12453627 (-)
G33030 NA non-coding upstream 1036901 13103953 ~ 13106250 (-)
G33070 NA non-coding upstream 1188311 13255363 ~ 13257313 (-)
G33076 LOC104962440 non-coding upstream 1244451 13311503 ~ 13311800 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 176707 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 2628164 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 3160400 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 5377977 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 7075894 4941059 ~ 4986384 (-)
AMCG00019284 NA other upstream 346102 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 1101384 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 1595064 13662116 ~ 13665230 (-)
G33163 NA other upstream 2424839 14491891 ~ 14558290 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 2884790 14951842 ~ 14991996 (-)

Expression


Co-expression Network