G32844


Basic Information

Item Value
gene id G32844
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12452597 ~ 12453627 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41149
CATCTACCAGGTGTTACTAATGACATTTAAACTTACTTTCATTGCTCTCTTTAAGCAGAGCGTCATCATTGTCATCATCCTCCTCTCCAGTCTTGATCTCCTCAGAGGGGGgcCGGCAGCTCCTTGGCCAGCTTGATGACCATGTTCTCCAGGTAGTCCGGCAGGCTTTTGAACTGCTGGTTGGTGGGCTGGAAGAAGTGTGGGCTCCTGCGGGCCAGCAGCCTGAGAGCTCTCCAGCCATAGTTGGAGTTCTTCACCGCCCTGAgggtcacacacagacacaggtttTTAAGCTcattttgcttgtgtttttgaaccATAAAAAGCAAGTTAATGCATTCActatcacatacacacacacaagtggaGGTTACTAAAGAACAAAGATGGGAATTCTGAAGGAGGCCAGTCAACACCATCTACATAGATTTGCAATACCTTCTACTGTGGCAAAAGTGTCTCCCTGCCAGTTGGACTAACATGACGTAAGTCTAAGGGCTGACATTTTGGCGACTTCTAATAATTTCTgtaaaaacacatctgtaaaGCTACTATAAATGAGGTTTTATATGGCAAGATCAAGGGAGCAGAATCACTTTGGTAGTTGGCACAGGTTCTGTGTAAATGAGGTCTGCTTGGTGTTTGTTACACAGGGATGACAGtattgcagaaattgaattTTTACCTTTATAGATTAAATGCTTTTGTTAAACACTGATATACAGCAATGGACAGCTATTGAATGAGCTGTCAAACTGCCAAAATAAGCTACATATAGCTACAATTTGAGTgaacccttttcttttttaagttcaTACTTGTATTCATCTTCAACCATGTTTGCAGGATCAGCCTGTTCAATGGCCTCTTCAAAAAACTCCTCCAGTGTTGGCATAAACTCTCTGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41149 True 909 lncRNA 0.43 2 12452597 12453627

Neighbor

gene id symbol gene type direction distance location
AMCG00019288 NA coding downstream 7411 12442688 ~ 12445186 (-)
AMCG00019279 piezo2 coding downstream 313990 12078562 ~ 12138607 (-)
AMCG00019278 NA coding downstream 399379 12052660 ~ 12053218 (-)
AMCG00019277 apcdd1,LOC107383547,LOC100712112 coding downstream 498138 11936104 ~ 11954459 (-)
AMCG00019266 LOC106596660,LOC106569828,LOC100697261 coding downstream 678280 11758115 ~ 11774317 (-)
AMCG00019286 usp14,LOC106569325 coding upstream 1452 12455079 ~ 12463992 (-)
AMCG00019287 rock1,LOC106569322 coding upstream 12499 12466126 ~ 12504550 (-)
AMCG00019291 NA coding upstream 146906 12600533 ~ 12613847 (-)
AMCG00019292 abhd3 coding upstream 162520 12616147 ~ 12635259 (-)
AMCG00019303 NA coding upstream 485380 12939007 ~ 12965910 (-)
G32825 NA non-coding downstream 85371 12366786 ~ 12367226 (-)
G32786 NA non-coding downstream 385545 12062278 ~ 12067052 (-)
G32784 NA non-coding downstream 392346 12059624 ~ 12060251 (-)
G32779 NA non-coding downstream 451432 12000950 ~ 12001165 (-)
G32773 NA non-coding downstream 473324 11930504 ~ 11979273 (-)
G33030 NA non-coding upstream 650326 13103953 ~ 13106250 (-)
G33070 NA non-coding upstream 801736 13255363 ~ 13257313 (-)
G33076 LOC104962440 non-coding upstream 857876 13311503 ~ 13311800 (-)
G33092 NA non-coding upstream 1179659 13633286 ~ 13633502 (-)
G33132 NA non-coding upstream 1628088 14081715 ~ 14081918 (-)
AMCG00019284 NA other downstream 29277 12413154 ~ 12423320 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 567026 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 3018483 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 3550719 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 5768296 6680625 ~ 6684301 (-)
AMCG00019312 NA other upstream 714809 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 1208489 13662116 ~ 13665230 (-)
G33163 NA other upstream 2038264 14491891 ~ 14558290 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 2498215 14951842 ~ 14991996 (-)
G33381 ube2v2,LOC107732116 other upstream 3238855 15692482 ~ 15721452 (-)

Expression


Co-expression Network