G33153


Basic Information

Item Value
gene id G33153
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 14285565 ~ 14286016 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41546
aaagttatacattgatttgcatgttaatgagggaaataagtatttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacgtttggcaactcgaaccttcagctccctccacagattttctatgggattaaggtctggagactggctaggccactccaggaccttaatgtgcttcttcttgagccactcctttgttgccttggctgtgtgttttgggtcattgtcatgctggaatacccatccacgacccattttcaatgccctcaCCCAACATTTGACgatacatggccccgtccatcgtccatttgatgcggtgcagttgtcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41546 True 452 lncRNA 0.48 1 14285565 14286016

Neighbor

gene id symbol gene type direction distance location
AMCG00019316 NA coding upstream 610813 13670253 ~ 13674752 (+)
AMCG00019314 psma8,LOC100304914,LOC103029839,LOC105907112,LOC105011885,LOC107572146,LOC102789190 coding upstream 618988 13662222 ~ 13666577 (+)
AMCG00019306 NA coding upstream 974743 13292718 ~ 13310822 (+)
AMCG00019309 NA coding upstream 1048739 13214956 ~ 13236826 (+)
AMCG00019308 NA coding upstream 1123503 13153820 ~ 13162062 (+)
AMCG00019322 NA coding downstream 386957 14672973 ~ 14698199 (+)
AMCG00019321 NA coding downstream 428789 14714805 ~ 14720892 (+)
AMCG00019325 NA coding downstream 610809 14896825 ~ 14901846 (+)
AMCG00019331 NA coding downstream 617326 14903342 ~ 14907478 (+)
AMCG00019324 NA coding downstream 628009 14914025 ~ 14927971 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding upstream 124862 14152802 ~ 14160703 (+)
G33093 NA non-coding upstream 647394 13633702 ~ 13638171 (+)
G33075 LOC104962440 non-coding upstream 973823 13311414 ~ 13311742 (+)
G32893 NA non-coding upstream 1671639 12613285 ~ 12613926 (+)
G32892 NA non-coding upstream 1673032 12609401 ~ 12612533 (+)
G33161 NA non-coding downstream 205876 14491892 ~ 14492206 (+)
G33307 NA non-coding downstream 1198062 15484078 ~ 15533196 (+)
G33392 NA non-coding downstream 1642553 15928569 ~ 15931201 (+)
G33404 NA non-coding downstream 1716780 16002796 ~ 16003201 (+)
G33408 NA non-coding downstream 1814942 16100958 ~ 16101159 (+)
G32539 NA other upstream 3876068 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 4656903 9369898 ~ 9628662 (+)
G32286 NA other upstream 4746354 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 4936746 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 5900973 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 153237 14439253 ~ 14486706 (+)
G33283 NA other downstream 878332 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 1268803 15554819 ~ 15626955 (+)
G33406 NA other downstream 1757926 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 3163304 17449320 ~ 17452659 (+)

Expression


Co-expression Network