G33159 (LOC103376870)


Basic Information

Item Value
gene id G33159
gene name LOC103376870
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 14439253 ~ 14486706 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41554
TTCCActgtgcaggctggtggtggtggtgtaatggtgtgggggatgttttcttggcacactttaggccccttagtgccaattgggcatcgtttaaatgccacggcctacctgagcattgtttctgaccatgtccatccctttatgaccaccatgtacccatcctctgatggctacttccagcaggataatgcaccatgtcacaaaggtcgaatcatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgNgggtcaaacacagtattagtatgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41554 True 485 TUCP 0.47 2 14439253 14486706

Neighbor

gene id symbol gene type direction distance location
AMCG00019316 NA coding upstream 764501 13670253 ~ 13674752 (+)
AMCG00019314 psma8,LOC100304914,LOC103029839,LOC105907112,LOC105011885,LOC107572146,LOC102789190 coding upstream 772676 13662222 ~ 13666577 (+)
AMCG00019306 NA coding upstream 1128431 13292718 ~ 13310822 (+)
AMCG00019309 NA coding upstream 1202427 13214956 ~ 13236826 (+)
AMCG00019308 NA coding upstream 1277191 13153820 ~ 13162062 (+)
AMCG00019322 NA coding downstream 186267 14672973 ~ 14698199 (+)
AMCG00019321 NA coding downstream 228099 14714805 ~ 14720892 (+)
AMCG00019325 NA coding downstream 410119 14896825 ~ 14901846 (+)
AMCG00019331 NA coding downstream 416636 14903342 ~ 14907478 (+)
AMCG00019324 NA coding downstream 427319 14914025 ~ 14927971 (+)
G33153 NA non-coding upstream 153237 14285565 ~ 14286016 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding upstream 278550 14152802 ~ 14160703 (+)
G33093 NA non-coding upstream 801082 13633702 ~ 13638171 (+)
G33075 LOC104962440 non-coding upstream 1127511 13311414 ~ 13311742 (+)
G32893 NA non-coding upstream 1825327 12613285 ~ 12613926 (+)
G33161 NA non-coding downstream 5186 14491892 ~ 14492206 (+)
G33307 NA non-coding downstream 997372 15484078 ~ 15533196 (+)
G33392 NA non-coding downstream 1441863 15928569 ~ 15931201 (+)
G33404 NA non-coding downstream 1516090 16002796 ~ 16003201 (+)
G33408 NA non-coding downstream 1614252 16100958 ~ 16101159 (+)
G32539 NA other upstream 4029756 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 4810591 9369898 ~ 9628662 (+)
G32286 NA other upstream 4900042 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 5090434 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 6054661 8345455 ~ 8384592 (+)
G33283 NA other downstream 677642 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 1068113 15554819 ~ 15626955 (+)
G33406 NA other downstream 1557236 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 2962614 17449320 ~ 17452659 (+)
AMCG00019402 NA other downstream 4518318 19005024 ~ 19021412 (+)

Expression


Co-expression Network