G33163


Basic Information

Item Value
gene id G33163
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 14491891 ~ 14558290 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41559
cctaatctcagcttgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcgattattcacaaatggaagaaacacaaaataactgtcagtctccctcggtctggggctccatgcaagatctcacctggtgaggaatcagcccagaactaca
>TU41560
CTGTGTAGAGTacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcgattattcacaaatggaagaaacacaaaataactgtcagtctccctcggtctggggctccatgcaagatctcacctggtgaggaatcagcccagaactaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41559 True 302 TUCP 0.47 2 14491891 14492218
TU41560 False 283 TUCP 0.48 3 14491891 14558290

Neighbor

gene id symbol gene type direction distance location
AMCG00019320 cdh2 coding downstream 312177 14152717 ~ 14179714 (-)
AMCG00019319 NA coding downstream 667263 13817357 ~ 13824628 (-)
AMCG00019317 LOC107735723 coding downstream 733073 13749854 ~ 13758818 (-)
AMCG00019318 kctd1,LOC103479566,LOC108239680 coding downstream 752520 13733965 ~ 13739371 (-)
AMCG00019315 ss18 coding downstream 830853 13630005 ~ 13661038 (-)
AMCG00019327 NA coding upstream 58629 14616919 ~ 14638232 (-)
AMCG00019326 b4galt6,LOC104925469,LOC106560385 coding upstream 162569 14720859 ~ 14731647 (-)
AMCG00019330 NA coding upstream 218518 14776808 ~ 14782550 (-)
AMCG00019328 NA coding upstream 278940 14837230 ~ 14895216 (-)
AMCG00019329 LOC107559729,LOC107553429,LOC104958571 coding upstream 368411 14926701 ~ 14937229 (-)
G33132 NA non-coding downstream 409973 14081715 ~ 14081918 (-)
G33092 NA non-coding downstream 858389 13633286 ~ 13633502 (-)
G33076 LOC104962440 non-coding downstream 1180091 13311503 ~ 13311800 (-)
G33070 NA non-coding downstream 1234578 13255363 ~ 13257313 (-)
G33030 NA non-coding downstream 1385641 13103953 ~ 13106250 (-)
G33204 NA non-coding upstream 134415 14692705 ~ 14698412 (-)
G33206 NA non-coding upstream 156501 14714791 ~ 14718233 (-)
G33268 NA non-coding upstream 503484 15061774 ~ 15062351 (-)
G33282 NA non-coding upstream 603422 15161712 ~ 15161967 (-)
G33285 NA non-coding upstream 624490 15182780 ~ 15184537 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 826661 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 1303599 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 2068571 12413154 ~ 12423320 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 2606320 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 5057777 9251152 ~ 9434114 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 393552 14951842 ~ 14991996 (-)
G33381 ube2v2,LOC107732116 other upstream 1134192 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 3826577 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 4736522 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 4884105 19442395 ~ 19454969 (-)

Expression


Co-expression Network