G33204


Basic Information

Item Value
gene id G33204
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 14692705 ~ 14698412 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41616
AATGTagcaagaaaacatttattttttgcggAAAGTTATATTACTACTCAAATGAAAACTGTAGTGTTATATAAACTCACTACGACATATTACAGTAGGCATTactgcatacatacattcacacacacatatgctttATCTTgcagttaaaagtaaaaatctgcttgaataataaaatggaagaaagtaaaaaaacatacatatatgaatGTAATGCGTTTTATTGAGATGTTTGGgggaaaatacatgtaatttgttTGCTGAATTGTTTCCAGACATGGTACTTCTATAATGAGAGATCTGATGAGCACAGTGGtcttaagcaaaacaaaaaattacaatGGCACACATACTGCTTCTAGTAGGCCCCTTGCTatgaaaactaattaaaaatgttttactgaccattacagaaaataaacacatcttgACTTGGtagcatgcatacatacatggatacatacacacatacttgtGTTACATGAAATAAGTGCTTACTGCTAAAGATGGCAATGCTCCTTTTGGGAAGGTTGCAAAGTAAATATACAGGTTAAATTGCAGTTCAAGGTCTGATCAAACAgttcaaaatcaaaattgtgTATAATAACACTCAGTCCAAATATTGCTGTATGGAAGGTGTGCTGAATTAAGTTTACTTACGTAATAACATTAGACACCCAAGGATAAGGAGCCCAATGCCTGCAGGTCCAAATACAGCACCAGATGTTTTTCTTGACTCTCCACAGGATTTATCTTTATTGCAGGTACAAACATCAACTTGTAAAACCTGTTTGTCAGGACAGGACAACCCTTGTTGGTCTTTAACTTCAAGACCGATTGTATATAAACCAGGCCACATCTTCTCCGCATTCCTTAGGATTACAGATGTATCttcaGAGGTTCAACTGTCCATTTTCCCTTTGTATCTTCAGGTATAATTGTGAATGAAAACGGGGCTCCATTGGGATCAATGTCTCCATCCTCAGCAGTGACATACACAACGTGGTCATCTGTACATAAAATCTGTGAAGTACTTGTAAGATGAGGACAGTGATCATTGAAGTCTTCAACCTGAATGGCAATGGTACCAGTGGCTGTTTTTGAAGGTAAATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41616 True 1114 lncRNA 0.36 3 14692705 14698412

Neighbor

gene id symbol gene type direction distance location
AMCG00019327 NA coding downstream 54473 14616919 ~ 14638232 (-)
AMCG00019320 cdh2 coding downstream 512991 14152717 ~ 14179714 (-)
AMCG00019319 NA coding downstream 868077 13817357 ~ 13824628 (-)
AMCG00019317 LOC107735723 coding downstream 933887 13749854 ~ 13758818 (-)
AMCG00019318 kctd1,LOC103479566,LOC108239680 coding downstream 953334 13733965 ~ 13739371 (-)
AMCG00019326 b4galt6,LOC104925469,LOC106560385 coding upstream 22447 14720859 ~ 14731647 (-)
AMCG00019330 NA coding upstream 78396 14776808 ~ 14782550 (-)
AMCG00019328 NA coding upstream 138818 14837230 ~ 14895216 (-)
AMCG00019329 LOC107559729,LOC107553429,LOC104958571 coding upstream 228289 14926701 ~ 14937229 (-)
AMCG00019332 NA coding upstream 295396 14993808 ~ 15000069 (-)
G33132 NA non-coding downstream 610787 14081715 ~ 14081918 (-)
G33092 NA non-coding downstream 1059203 13633286 ~ 13633502 (-)
G33076 LOC104962440 non-coding downstream 1380905 13311503 ~ 13311800 (-)
G33070 NA non-coding downstream 1435392 13255363 ~ 13257313 (-)
G33030 NA non-coding downstream 1586455 13103953 ~ 13106250 (-)
G33206 NA non-coding upstream 16379 14714791 ~ 14718233 (-)
G33268 NA non-coding upstream 363362 15061774 ~ 15062351 (-)
G33282 NA non-coding upstream 463300 15161712 ~ 15161967 (-)
G33285 NA non-coding upstream 484368 15182780 ~ 15184537 (-)
G33291 NA non-coding upstream 555620 15254032 ~ 15256023 (-)
G33163 NA other downstream 134415 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 1027475 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 1504413 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 2269385 12413154 ~ 12423320 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 2807134 11852108 ~ 11885571 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 253430 14951842 ~ 14991996 (-)
G33381 ube2v2,LOC107732116 other upstream 994070 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 3686455 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 4596400 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 4743983 19442395 ~ 19454969 (-)

Expression


Co-expression Network