G33268


Basic Information

Item Value
gene id G33268
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15061774 ~ 15062351 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41689
ATTTATTAATTCTTACCTTTCACACAATCAAAagcactatatattttttaattatatatttatatatgatgtCTTATATATATGTACCATACACAGGTTAATGCTGAATACAGATGATATCGTGGTATGGTATGTTTCCTTTTATCTTAACAGtactacttgtaatttagtcatttattctcctgtaagattgcacttatacaacgttttgtcatactcttgcctttgcattactagcacttgtattgtttattttgatttcccttacgctccctctcccttagttcttaactttgacttaatatcttgtctgcacttatcagcacttacattctaggatgtaagaccttatgtattgtttatctCGTATACAGTTgcgtaaattgtgaatttgtaaaatgtattatgccttgaattgcactgtattattttactttgtattgtgcttatattttgtaagtcgccccctggacaagggcgtctgctaagaaataaataataatcatataaacaGTAGTTTAAAgatgtgtatgtaaatgtaaaggtGTATTATACTCATAATCTGCATCAGAATTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41689 True 578 lncRNA 0.30 1 15061774 15062351

Neighbor

gene id symbol gene type direction distance location
AMCG00019334 klhl14,LOC106599787 coding downstream 30543 15030353 ~ 15031231 (-)
AMCG00019333 klhl14 coding downstream 43708 15003452 ~ 15018066 (-)
AMCG00019332 NA coding downstream 61705 14993808 ~ 15000069 (-)
AMCG00019329 LOC107559729,LOC107553429,LOC104958571 coding downstream 124545 14926701 ~ 14937229 (-)
AMCG00019328 NA coding downstream 166558 14837230 ~ 14895216 (-)
AMCG00019335 NA coding upstream 75951 15138302 ~ 15153516 (-)
AMCG00019339 NA coding upstream 243572 15305923 ~ 15314117 (-)
AMCG00019338 NA coding upstream 275320 15337671 ~ 15343274 (-)
AMCG00019341 NA coding upstream 295657 15358008 ~ 15358663 (-)
AMCG00019340 NA coding upstream 297349 15359700 ~ 15360068 (-)
G33206 NA non-coding downstream 343541 14714791 ~ 14718233 (-)
G33204 NA non-coding downstream 363362 14692705 ~ 14698412 (-)
G33132 NA non-coding downstream 979856 14081715 ~ 14081918 (-)
G33092 NA non-coding downstream 1428272 13633286 ~ 13633502 (-)
G33076 LOC104962440 non-coding downstream 1749974 13311503 ~ 13311800 (-)
G33282 NA non-coding upstream 99361 15161712 ~ 15161967 (-)
G33285 NA non-coding upstream 120429 15182780 ~ 15184537 (-)
G33291 NA non-coding upstream 191681 15254032 ~ 15256023 (-)
G33393 NA non-coding upstream 795826 15858177 ~ 15931208 (-)
G33419 NA non-coding upstream 1209716 16272067 ~ 16311866 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 69778 14951842 ~ 14991996 (-)
G33163 NA other downstream 503484 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 1396544 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 1873482 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 2638454 12413154 ~ 12423320 (-)
G33381 ube2v2,LOC107732116 other upstream 630131 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 3322516 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 4232461 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 4380044 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 5681179 20743530 ~ 20765496 (-)

Expression


Co-expression Network