G33291


Basic Information

Item Value
gene id G33291
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15254032 ~ 15256023 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41716
AAATGACTACAAATCTaaacatgtacaaataaatataaagtgcaGGCTTGATGACAAATCTAATttcttttcagaaacaaaataatgcaaatgacGCACAAAGCCACACTGTttaatttacttgttttattcttATACATTAAGATCAGACTTTTTTcttaacacaaatgtaaaatacagcaCCACTGAAGACATTATCCCTGAATTCTAATACAACACTAATTCTCTTCAGTTATGCCTGCAATGCACTTTTAATAACAAATCAAGGATAATGcagtttaaacaattaaaaccttTTGCAACTAGCAGATGGCTCCTGTTCTgacttttacatttgtgtttcttgtgcCACTGGATGGAGCTTTTCTTCTTTGGTAGTATCTGAAGAAGTATTTCACGATGAATACTGGCGAATGGGTCTTACTTGAAATGGTTCCCCATTAAGATTCACGTTTCCTCAAACTGTTAAGCATAGGTTCATTTCACATCAATTACACTAATACATTTGATGTCAGCTGTAATTTTAAGAGCGCTTCTCTGAAAAAGGCATACAATGGcaaaattgaaatgtgtgtaaacaTTAAGAATTCTGACAAAAACAGTTTGTAACAAATCAGTCACTCTTTCtgttaacagaaaacaaaatcaaaatgtaattgacaCAGTTTTAAATCAGCAGTGGTAAAAAGGTAAGATGtacttaattaataatacattaaggTTACATGTATATTACAGGTACATTTTATACCAAACAAGTATCTAATTGAATACTGTCTGCCCATAAATATTTCAGAGGGAAAGTCAAGTAACACATTGCTTGGTTATGCAGAagtacttttcttttaaagacaAGCTTCAGTACTGGTGATGATACCAGGTAAGACAGTATCAGATAATTATTGGCACAGCACAAGCCCTGATGTTTATTAATGAATACTTTGATAGAATGGGCTCCCATTCTTTACAGCTTAGGTGTGGAATGGATACAAATGTAACTGTTCCACTACAGAATAATTCTGTAttcaaaaaaagcaaacatttcacAACTTGCAATCATATAACTGATACAAATCATAGAATCTTACAGTTTACATGTatgtcataataaataaataagttacaaATTACGTGTACAGTGATTCACCACAGTACAACAGAGACATTATGGGCTGGAAGaaagaatgagaaaataaagacaaaacattttataaggCCTGATCAACATACTGTTTGATCTGTATTACTGCAGCTgctctgtgaaaaaaaaaaaaatcaacacaaattcAAATCACTCAGATGCTTCACATTGAAAGAAGAATGACCAAAAAAGAACCCACTTTGCTTTTTGTTCCGTGTGCATGTACGTCAGAAATATCTTAAGAGATGTCTTTGCCTAATGTTTTGTGCAGTATCCTCATGTGGATGTTTTTAGTCGTAATTACTAAATTCCAGGTCTCAAAGAAATGTATGATGGTGAAACTTGATTAACATATAAAAAGTCcataatgtttttcaaattacagGCACATTTTACAGTTCAGGCCATGCTAATTTGTAAGTGAGTTGTAGTGCATATTTTAATGGCTTTTTCTTCTATCCCACACGTTTTCAGACAGTGCTATACTTCAAATTCAATGATTCGGTTTCATAGGATAGCTTATTCACATTCCTCTGTTTTCATGTAAACATTGAAATACTTACAGTGTTGCTATGAAGTAGacacaaagcttaaaaaaaagaaataagttaaaaatgtatttttaaatactttaaatggtGCAGGAATGAAACTAAATCCAAAAGTATATACAATTTAGTGTTCACAAGTTTTAAATCACTGGCTACCGAACTACTAAGCAGGCAACACATAGCTTTGATGGGCCTATGCAGTCATCATGGCAGAAGGCTCCACAGCCTTTACACACAATCATGGCTTTCAGCCGACATGAGCATTTTAGCTCCAGTTCATCTGCATTGCTGCCGTCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41716 True 1992 lncRNA 0.33 1 15254032 15256023

Neighbor

gene id symbol gene type direction distance location
AMCG00019335 NA coding downstream 100516 15138302 ~ 15153516 (-)
AMCG00019334 klhl14,LOC106599787 coding downstream 222801 15030353 ~ 15031231 (-)
AMCG00019333 klhl14 coding downstream 235966 15003452 ~ 15018066 (-)
AMCG00019332 NA coding downstream 253963 14993808 ~ 15000069 (-)
AMCG00019329 LOC107559729,LOC107553429,LOC104958571 coding downstream 316803 14926701 ~ 14937229 (-)
AMCG00019339 NA coding upstream 49900 15305923 ~ 15314117 (-)
AMCG00019338 NA coding upstream 81648 15337671 ~ 15343274 (-)
AMCG00019341 NA coding upstream 101985 15358008 ~ 15358663 (-)
AMCG00019340 NA coding upstream 103677 15359700 ~ 15360068 (-)
AMCG00019343 NA coding upstream 277212 15533235 ~ 15551028 (-)
G33285 NA non-coding downstream 69495 15182780 ~ 15184537 (-)
G33282 NA non-coding downstream 92065 15161712 ~ 15161967 (-)
G33268 NA non-coding downstream 191681 15061774 ~ 15062351 (-)
G33206 NA non-coding downstream 535799 14714791 ~ 14718233 (-)
G33204 NA non-coding downstream 555620 14692705 ~ 14698412 (-)
G33393 NA non-coding upstream 602154 15858177 ~ 15931208 (-)
G33419 NA non-coding upstream 1016044 16272067 ~ 16311866 (-)
G33461 NA non-coding upstream 1362279 16618302 ~ 16618691 (-)
G33531 NA non-coding upstream 1787995 17044018 ~ 17044239 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding upstream 1793491 17049514 ~ 17049746 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 262036 14951842 ~ 14991996 (-)
G33163 NA other downstream 695742 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 1588802 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 2065740 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 2830712 12413154 ~ 12423320 (-)
G33381 ube2v2,LOC107732116 other upstream 436459 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 3128844 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 4038789 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 4186372 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 5487507 20743530 ~ 20765496 (-)

Expression


Co-expression Network