G33404


Basic Information

Item Value
gene id G33404
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 16002796 ~ 16003201 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41859
gattatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggtagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggcaaAAATGCCATGTTGAttctagaggtcagaggagaatgggccgactgaatcaagctgatagaagagcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41859 True 406 lncRNA 0.43 1 16002796 16003201

Neighbor

gene id symbol gene type direction distance location
AMCG00019350 ub2v2,ube2v2 coding upstream 297716 15693042 ~ 15705080 (+)
AMCG00019346 mcm4,LOC106569128 coding upstream 313947 15681904 ~ 15688849 (+)
AMCG00019344 NA coding upstream 421782 15566655 ~ 15581014 (+)
AMCG00019347 mapre2 coding upstream 472885 15520426 ~ 15529911 (+)
AMCG00019342 NA coding upstream 523060 15436315 ~ 15479736 (+)
AMCG00019354 sntg1 coding downstream 237181 16240382 ~ 16266099 (+)
AMCG00019365 NA coding downstream 490266 16493467 ~ 16856282 (+)
AMCG00019361 NA coding downstream 1040895 17044096 ~ 17050175 (+)
AMCG00019368 NA coding downstream 1072469 17075670 ~ 17078562 (+)
AMCG00019367 NA coding downstream 1086868 17090069 ~ 17091118 (+)
G33392 NA non-coding upstream 71595 15928569 ~ 15931201 (+)
G33307 NA non-coding upstream 469600 15484078 ~ 15533196 (+)
G33161 NA non-coding upstream 1510590 14491892 ~ 14492206 (+)
G33153 NA non-coding upstream 1716780 14285565 ~ 14286016 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding upstream 1842093 14152802 ~ 14160703 (+)
G33408 NA non-coding downstream 97757 16100958 ~ 16101159 (+)
G33422 NA non-coding downstream 362913 16366114 ~ 16366342 (+)
G33444 NA non-coding downstream 485670 16488871 ~ 16491053 (+)
G33448 NA non-coding downstream 493640 16496841 ~ 16504076 (+)
G33474 NA non-coding downstream 794948 16798149 ~ 16800927 (+)
AMCG00019345 NA other upstream 375841 15554819 ~ 15626955 (+)
G33283 NA other upstream 832955 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 1516090 14439253 ~ 14486706 (+)
G32539 NA other upstream 5593299 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 6374134 9369898 ~ 9628662 (+)
G33406 NA other downstream 40741 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 1446119 17449320 ~ 17452659 (+)
AMCG00019402 NA other downstream 3001823 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 3282335 19285536 ~ 19294208 (+)
AMCG00019428 LOC107595150 other downstream 3448046 19451247 ~ 19455137 (+)

Expression


Co-expression Network