G33579


Basic Information

Item Value
gene id G33579
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17303458 ~ 17303696 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42060
TGACGGTTTCCTCAATCCGCGGAGCACGAGAGGATGGGGTGGAGGGGGCAGTGGGCCTCACCTGAAAAACAGGTACACAGCTGTCCCTCTCAGTGTATTTGGGATCCCTATCTGCCACCATAACTGGTGGCCCCCGATTGTGTGAAACGGCTCTAAGAGTATTTGTGGCCGCCTCAGCCGGCAGCGTAAAGGTGGTCGCAGGGTCCTCGAGAGTACAGCTCGGCGACTGCCCAAACCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42060 True 239 lncRNA 0.59 1 17303458 17303696

Neighbor

gene id symbol gene type direction distance location
AMCG00019362 lypla1,lypa1 coding downstream 228273 17068638 ~ 17075185 (-)
AMCG00019364 tcea1 coding downstream 238777 17055972 ~ 17064681 (-)
AMCG00019363 atp6v1h,LOC107686042,LOC107664082 coding downstream 297320 16987641 ~ 17006138 (-)
AMCG00019366 NA coding downstream 326488 16955890 ~ 16976970 (-)
AMCG00019360 NA coding downstream 404391 16891738 ~ 16899067 (-)
AMCG00019372 tmem68,LOC106569251,LOC107577454,LOC104952032 coding upstream 22895 17326591 ~ 17345515 (-)
AMCG00019380 NA coding upstream 110510 17414206 ~ 17421484 (-)
AMCG00019378 rs20,rps20 coding upstream 118972 17422668 ~ 17424664 (-)
AMCG00019381 NA coding upstream 134492 17438188 ~ 17440320 (-)
AMCG00019379 sdr16c5,LOC106599159,LOC105008851 coding upstream 156068 17459764 ~ 17477757 (-)
G33533 NA non-coding downstream 249126 17049997 ~ 17054332 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding downstream 253712 17049514 ~ 17049746 (-)
G33531 NA non-coding downstream 259219 17044018 ~ 17044239 (-)
G33461 NA non-coding downstream 684767 16618302 ~ 16618691 (-)
G33419 NA non-coding downstream 991592 16272067 ~ 16311866 (-)
G33584 NA non-coding upstream 9643 17313339 ~ 17315430 (-)
G33586 NA non-coding upstream 11852 17315548 ~ 17320145 (-)
G33603 NA non-coding upstream 21573 17325269 ~ 17326458 (-)
G33637 NA non-coding upstream 126610 17430306 ~ 17434591 (-)
G33665 NA non-coding upstream 320264 17623960 ~ 17624226 (-)
G33381 ube2v2,LOC107732116 other downstream 1582006 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 2311462 14951842 ~ 14991996 (-)
G33163 NA other downstream 2745168 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 3638228 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 4115166 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 1081171 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 1991116 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 2138699 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 3439834 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 5366951 22670647 ~ 22744182 (-)

Expression


Co-expression Network