G33634


Basic Information

Item Value
gene id G33634
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17430953 ~ 17432628 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42132
CCttcttgtatatttatttaaacatttcatatactgtatatacagtgagaaCGCTGTAGGCTGTAAAAATCTGCAGCTCTATTGTTTAATAGCAGCAAAgtactataaaaaaacaacaaaaacatgttattcaCCAGACAATAAATAATCTGTCTTTGGATGATGTAAATGTTAGGCCGTTGATGAAAAGCTGCAGCGTTATAATGTAATTTCTATTTTACACAGcttatacacaaatatatatgaattctTTTGTCTATATTTGTACAAATACAACAGtagtttgtaaaatacatttttaagtacaATATACATGATTAGCAACACAAGTTCATTATCACAGGATGGCATTACTGAAATGTGATGAACAAAATCGCAGCTGGAATGCAGTTCCCCTCTTAACAAATCAACtcctccatttctctctcagTTCTTTCAAGCCCCAGAGAGGGTGCTCTTCTGCATCTTCTTGACATTTCCATTCAATAACCTTTAAGGAGTTCTTCAGCACAATAATCCCAACTCATTCCCTCCCGAAAACGCCATTCAGCAGGGAATCCACTTATAGACACCCAGCATATTGAGGGGTATGCACATACTTCCATTGAAGTGCACATGAATACATTGCGATATTACAGATAAGTCCATAAAATACTACAGAAGTCacagtacaaaaatatacaatacaactAAGCACAATCTCTGTCCATTCAGCTTAATTTGAtactttgtaaaaataataataaaaacgttCTGAATGAGAAATAGAGGTCTGTAGCACCACAAGGAGCATTTTGAAGTATACATTAGCAGCTTGATCCAATACCAAAATATTGCAGGAGTGTTTCTTAGATACACATTCAATATGGTTCACTTGTACCACTGACGTTCATACTGAAAGTTTACATGAATTGCTAAAGGTCTGTGCATCTCACAAGAGGCTCCCAGGACTTCAAAAAGCCACTTCCTTCtaaaatgtatgatgtattatatattgaaacaaaGAACCTAGAtcattcaatacaaatatactgcAGAAAGTAGGGTGATATTATTCAATATATGTTgttcatatattatttgattGAGGAATtctctgaaaatgtaaagaagGTTGAGAAGGTGTTTTCAACACATATGACAAAGTCTATATTTATAGAACTGTCCCGGTACTGTGAAGTAATTAACAATTTCCTGAAAAGAgtaaaacactgattttaatgTAGCATATGGAATGTCTATTCCTAGTTagaacaacaggaaaaaaacatggttCGCCAAAACAAGATTAAGTGGAGCAATGCCACtggaaactgtatttttaccaAACTTTGGTACTTCCAAGTAAACTCAGATTTGAAACTTCAGGACAAAACATATTCAGATATGCAAcaccacattaaaaaataggctttaatatttaaaaaatgtgattgaaTGTCACTTATTCCTGGTTTTGgcaaatgtgtttgttgaaaTAAATCCTGCAGGTTACAAATGAATCAATGAATGTACAAAGCAGGAAATGCTTAAATAAGTATAATAGCAACCCTAcaattgtttttcatctttaaatggCTTTACAGGAGTAAAAAGTTATTGTGATTAAAACCTTCTGCATACATTTGTAAAGCCCCAAGTGAGAGACACAGAAGTTTTGTGCAAGTAAAGCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42132 True 1676 lncRNA 0.33 1 17430953 17432628

Neighbor

gene id symbol gene type direction distance location
AMCG00019375 lyn,LOC107728263,LOC108432264,LOC103026730 coding upstream 15256 17385850 ~ 17415697 (+)
AMCG00019371 NA coding upstream 60371 17345622 ~ 17370582 (+)
AMCG00019373 xkr4,LOC106569249 coding upstream 127087 17298706 ~ 17303866 (+)
AMCG00019374 xkr4,zgc:123035,LOC107679338,LOC107728991,LOC107714844,LOC107674319,LOC107567404 coding upstream 214409 17215654 ~ 17216544 (+)
AMCG00019370 NA coding upstream 216542 17154870 ~ 17214411 (+)
AMCG00019382 NA coding downstream 195764 17628392 ~ 17636437 (+)
AMCG00019388 fam110b,LOC107589885,LOC105031585,LOC108247726 coding downstream 274902 17707530 ~ 17708615 (+)
AMCG00019387 NA coding downstream 291795 17724423 ~ 17738652 (+)
AMCG00019385 LOC108412264,LOC105893799,LOC107718110,LOC107693703,LOC107722516,LOC107691428 coding downstream 327445 17760073 ~ 17764666 (+)
AMCG00019384 NA coding downstream 350706 17783334 ~ 17793587 (+)
G33615 NA non-coding upstream 6055 17422624 ~ 17424898 (+)
G33585 NA non-coding upstream 110918 17315673 ~ 17320035 (+)
G33521 NA non-coding upstream 372733 17057586 ~ 17058220 (+)
G33474 NA non-coding upstream 630026 16798149 ~ 16800927 (+)
G33448 NA non-coding upstream 926877 16496841 ~ 16504076 (+)
G33750 NA non-coding downstream 710868 18143496 ~ 18144704 (+)
G33794 NA non-coding downstream 952256 18384884 ~ 18389982 (+)
G33795 NA non-coding downstream 962773 18395401 ~ 18395619 (+)
G33796 NA non-coding downstream 966388 18399016 ~ 18399743 (+)
G33800 NA non-coding downstream 998736 18431364 ~ 18438265 (+)
G33406 NA other upstream 1349010 16043942 ~ 16081943 (+)
AMCG00019345 NA other upstream 1803998 15554819 ~ 15626955 (+)
G33283 NA other upstream 2261112 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 2944247 14439253 ~ 14486706 (+)
G32539 NA other upstream 7021456 10404639 ~ 10409497 (+)
AMCG00019376 NA other downstream 16692 17449320 ~ 17452659 (+)
AMCG00019402 NA other downstream 1572396 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 1852908 19285536 ~ 19294208 (+)
AMCG00019428 LOC107595150 other downstream 2018619 19451247 ~ 19455137 (+)
G34170 rpl7 other downstream 3174846 20607474 ~ 20610889 (+)

Expression


Co-expression Network