G33637


Basic Information

Item Value
gene id G33637
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17430306 ~ 17434591 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42135
TATTAGTTGAACTAAagcattttctgaaataaatcctTTGGTTTCAAAAGTTAGTATGCTACTATTTTGAGAAACAAATTGACATTCCAGTGCGAGAGACTGCAAGTAAAGAATGTAGTAAATAGTAGATTCTGCCATCTAACTGTTTTAATTGGAAGTATCGTGAATTTGACTGGTTAATTAAATTGCTTCCTTCTGAATCAttggtattttaattgataaaaccCATTTTAAGCTTGTAAAGTTTGaacagcactgtgtgtgtttggaagTTGTTGTGGTTGATTGAATGAAATAACCAGGTTTCTGCtgacatttttataatgtatataaagtaCATAGTGTACAAGAAACAATGGTAAAAGAGtataaaatcagaaaacatAGTGATAAGTAATTGTAATGAATGCAATCATGTAACACTATAGTCATCTTAAACTACGTATAATGCCCTTTTGAGACCACATTTGGTACTTTTCAAGTTGTAATGCATTATTTACCCCATTgagttcattattttgtttcattttaatgccaTTTGCCAGTGTCTTCACTACATATAAAGGGAGAAGGGTTTGCAGATAATCTGCAAAGAAGGACCTCACACACAACTCTGAACCTCATTCACTTTTAGTGCAGTGGCACCGGTCTAAACAATCAGTCTGTGCCTTTAGCTTTTTATCAAATTCAGGAAGTTGGCAAAGGCAaggttttgcttgtttgttttggtttttatttttatttttctcttttaggATTGACCATATacagtgaatttatttttttatgttgaacAGATTGCAACCATaatttatcatatatatacatttacgtgtgtgtttgtgtgtgtgtgtgtatttgaaagCAGGCTTTTTGAtgttattactttaaataatttggCTCTAGTAAAATTGGACTGGAAAATTACTTTAGgccatattttcaaatgtaatacagatACAGGCAGTGTTTGCCATGgtaaatttcatttttttttgtaaaactaaataCCATTGATTGAAGCCTTGAAGTGCCTGGTTTTGAGAGGGAAAGTCACATTTGTAGTATGTGCATATGTGTAAGaataaacaaagacatgcaGATGCACGTATCCCTGCACACATGCTGTGAGCTGGGCCATTATttagaaaaagacaaaatgtatatgaaacatTTCACTAAGGGAGAAATATAATCCACATTTGTATCCTTAAGGCTGTGTATTCTAGGTGCTGTCTATGTCAATCATCTTTACAAGctaattacaatttattttcatgcagtATTGGATGGCAACAAAGCCTGTAGTATCACTATCATATCACCATTATCCATGTGGATTTCTAAAACCATGCACCATCCAGTCATTACTGATAATCTAGTCAATCAAAACACTATCCTCCCCCTGGAGTCAGTATACAATAATTGAGCCCATCATGCTCTGTACAGCGCATATACAACTGTTGCATTCCTTTTCGTCCCTTTTAGAAATAATATCCcgatttaattgttattttaataccCTGCGTATGTAAATTagtgtgtttttactttttatgcacacacgtacatatatacatatatataatgagcCACATCTAGTTTTAGAAAGATGAATGAATGTTTTACTCaatgttttttcagttgtttgaaAATGGGTTTTAAATGTGCTATAAGTGTATCTAGAGTATGtggttttacaaaaatgctTGGTAAGCCTCTATATACggcatatttaaattatagcacTTTCTGATATCACATGCCTTTAGGAGTTAAATCTCTCattggcattttttttaaaataaaaaatatatataaacatgttatgTGCCATTAGAATTGTTGTATTTAGCTCTTTAGAATGTTAACAGTTGTATATAAAATGCtaaaaaaggttttttttttttttttttttttttacaggtacagtttttacagtgtttttactATCAAAGTGTCATTTTGCTTTACTTGCACAAAACTTCTGTGTCTCTCACTTGGGGCTTTACAAATGTATGCAGAAGGTTTTAATCACAATAACTTTTTACTCCTGTAAAGccatttaaagatgaaaaacaattgTAGGGTTGCTATTATACTTATTTAAGCATTTCCTGCTTTGTACATTCATTGATTCATTTGTAACCTGCAGGATTTAtttcaacaaacacatttgcCAAAACCAGGAATAAGTGACAttcaatcacattttttaaatattaaagcctattttttaatgtggtgTTGCATATCTGAATATGTTTTGTCCTGAAGTTTCAAATCTGAGTTTACTTGGAAGTACCAAAGTTtggtaaaaatacagtttccaGTGGCATTGCTCCACTTAATCTTGTTTTGGCGaaccatgtttttttcctgttgttctAACTAGGAATAGACATTCCATATGCTAcattaaaatcagtgttttacTCTTTTCAGGAAATTGTTAATTACTTCACAGTACCGGGACAGTTCTATAAATATAGACTTTGTCATATGTGTTGAAAACACCTTCTCAACcttctttacattttcagagaATTCCTCaatcaaataatatatgaacAACATATATTGAATAATATCACCCTACTTTCTgcagtatatttgtattgaatgaTCTAGGTTCtttgtttcaatatataatacatcatacattttaGAAGGAAGTGGCTTTTTGAAGTCCTGGGAGCCTCTTGTGAGATGCACAGACCTTTAGCAATTCATGTAAACTTTCAGTATGAACGTCAGTGGTACAAGTGAACCATATTGAATGTGTATCTAAGAAACACTCCTGCAATATTTTGGTATTGGATCAAGCTGCTAATGTATACTTCAAAATGCTCCTTGTGGTGCTACAGACCTCTATTTCTCATTCAGaacgtttttattattatttttacaaagtaTCAAATTAAGCTGAATGGACAGAGATTGTGCTTagttgtattgtatatttttgtactgtGACTTCTGTAGTATTTTATGGACTTATCTGTAATATCGCAATGTATTCATGTGCACTTCAATGGAAGTATGTGCATACCCCTCAATATGCTGGGTGTCTATAAGTGGATTCCCTGCTGAATGGCGTTTTCGGGAGGGAATGAGTTGGGATTATTGTGCTGAAGAACTCCTTAAAGGTTATTGAATGGAAATGTCAAGAAGATGCAGAAGAGCACCCTCTCTGGGGCTTGAAAGAActgagagagaaatggaggaGTTGATTTGTTAAGAGGGGAACTGCATTCCAGCTGCGATTTTGTTCATCACATTTCAGTAATGCCATCCTGTGATAATGAACTTGTGTTGCTAATCATGTATATtgtacttaaaaatgtattttacaaactaCTGTTGTATTTGTACAAATATAGACAAAagaattcatatatatttgtgtataagCTGTGTAAAATAGAAATTACATTATAACGCTGCAGCTTTTCATCAACGGCCTAACATTTACATCATCCAAAGACAGATTATTTATTGTCTGGtgaataacatgtttttgttgtttttttatagtacTTTGCTGCTATTAAACAATAGAGCTGCAGATTTTTACAGCCTACAGCGttctcactgtatatacagtatatgaaatgtttaaataaatatacaagaaGGATTTAGTGAATGTGTAGAAGTGAAATCTTactatttcaaaaacaaaacaaaaccgctgtgtgtgtatgtgtgcgtgtacgtgtgtgtgtgtgtgtacacatatGTAAGTGCATACGGTGTCATTTCTTTATTCCGTTATACAGGATAAGGAAAAAGGATGGCTAAACCATTGATTTAGGAGAGCGTTAGCAATGAATCTGatcctgtttttaaagatttgttaGTAATCtttggttttactttttaatgggTTTTTTTCCAAACTTTAACAGAAAAGTggataattttatttgtataaagcACAGCTGATATCAGactgtaaaaattaaatgttttttgcatttgtagGATAGAAAAAGGTTGTTAGTACTGATGTTCCTTTTCACTGCTTTCATATTCTACTCATTACAGAACTAATCTTTCAAGACCCTGAAAACTGATAGAGATCATTGTCTTTACAGTACATGTATTCTATCCAGCAAGTTAAAGGAAATTGATTTATTGGGGGGGACACTGTAAGCTGCAACTAAAATTCAGTTTCTATTGAAGGTAATCACACATTATCAACCTGCAAAAATTGTCATAAGTGTATTACAGCAGTAACTGATActaagtgttttatttcttgtgcaATAAAGATGGCAGTG

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42135 True 4286 lncRNA 0.32 1 17430306 17434591

Neighbor

gene id symbol gene type direction distance location
AMCG00019378 rs20,rps20 coding downstream 5642 17422668 ~ 17424664 (-)
AMCG00019380 NA coding downstream 8822 17414206 ~ 17421484 (-)
AMCG00019372 tmem68,LOC106569251,LOC107577454,LOC104952032 coding downstream 84791 17326591 ~ 17345515 (-)
AMCG00019362 lypla1,lypa1 coding downstream 355121 17068638 ~ 17075185 (-)
AMCG00019364 tcea1 coding downstream 365625 17055972 ~ 17064681 (-)
AMCG00019381 NA coding upstream 3597 17438188 ~ 17440320 (-)
AMCG00019379 sdr16c5,LOC106599159,LOC105008851 coding upstream 25173 17459764 ~ 17477757 (-)
AMCG00019377 NA coding upstream 46732 17481323 ~ 17486099 (-)
AMCG00019383 NA coding upstream 178525 17613116 ~ 17621891 (-)
AMCG00019391 NA coding upstream 372864 17807455 ~ 17840411 (-)
G33603 NA non-coding downstream 103848 17325269 ~ 17326458 (-)
G33586 NA non-coding downstream 110161 17315548 ~ 17320145 (-)
G33584 NA non-coding downstream 114876 17313339 ~ 17315430 (-)
G33579 NA non-coding downstream 126610 17303458 ~ 17303696 (-)
G33533 NA non-coding downstream 375974 17049997 ~ 17054332 (-)
G33665 NA non-coding upstream 189369 17623960 ~ 17624226 (-)
G33686 NA non-coding upstream 308571 17743162 ~ 17773325 (-)
G33758 rab2a non-coding upstream 744498 18179089 ~ 18198157 (-)
G33765 NA non-coding upstream 781017 18215608 ~ 18216742 (-)
G33830 NA non-coding upstream 1171550 18606141 ~ 18615254 (-)
G33381 ube2v2,LOC107732116 other downstream 1708854 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 2438310 14951842 ~ 14991996 (-)
G33163 NA other downstream 2872016 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 3765076 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 4242014 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 950276 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 1860221 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 2007804 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 3308939 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 5236056 22670647 ~ 22744182 (-)

Expression


Co-expression Network