G33809


Basic Information

Item Value
gene id G33809
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 18450617 ~ 18450841 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42334
GACATTTTCATAGGAGACTGTTTAGAAGATCATTTGTGCAATCTCTGTGTTAACCTATTCACGTACATAAAATGAGGGTAGCAACCACAAAACAATttacagtcaaaacaatcacTGATACCATTGTGGGCACTCCACAGTCCTGGCGGTAATTGTACACACTCTTGACTCACTCTTGAGCAGACAGGCAGTTTGGAGATTGTTTCCTGAGATGCATATCTTATA

Function

NR:

description
PREDICTED: KN motif and ankyrin repeat domain-containing protein 1-like isoform X2

GO:

id name namespace
GO:0050803 regulation of synapse structure or activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42334 True 225 lncRNA 0.40 1 18450617 18450841

Neighbor

gene id symbol gene type direction distance location
AMCG00019395 LOC102793628,LOC103377196,LOC107098905 coding upstream 72562 18337551 ~ 18378055 (+)
AMCG00019393 chd7,LOC107585562,LOC107688517,LOC107718105,LOC107589837,LOC106568873 coding upstream 154396 18257809 ~ 18296221 (+)
AMCG00019394 NA coding upstream 211004 18231215 ~ 18239613 (+)
AMCG00019389 rab2a coding upstream 243491 18179249 ~ 18207126 (+)
AMCG00019386 sdcbp coding upstream 646172 17799605 ~ 17804445 (+)
AMCG00019400 nkain4,LOC107724178 coding downstream 66298 18517139 ~ 18525098 (+)
AMCG00019397 LOC107666630,LOC107590209,LOC107586709,LOC107705256,LOC107721902,LOC107663693 coding downstream 156908 18607749 ~ 18661468 (+)
AMCG00019401 bhlhe22 coding downstream 360039 18810880 ~ 18811692 (+)
AMCG00019408 dnajc5b,LOC107656153,LOC107586796,LOC107721861,LOC107663636 coding downstream 630878 19081719 ~ 19089121 (+)
AMCG00019406 trim55b,LOC107586797,LOC107705202,LOC107663638,LOC107656154,LOC107590338,LOC107721936 coding downstream 645895 19096736 ~ 19119509 (+)
G33800 NA non-coding upstream 12352 18431364 ~ 18438265 (+)
G33796 NA non-coding upstream 50874 18399016 ~ 18399743 (+)
G33795 NA non-coding upstream 54998 18395401 ~ 18395619 (+)
G33794 NA non-coding upstream 60635 18384884 ~ 18389982 (+)
G33750 NA non-coding upstream 305913 18143496 ~ 18144704 (+)
G33810 NA non-coding downstream 292 18451133 ~ 18451403 (+)
G33812 NA non-coding downstream 125654 18576495 ~ 18583704 (+)
G33874 NA non-coding downstream 476206 18927047 ~ 18927287 (+)
G33913 NA non-coding downstream 756353 19207194 ~ 19209710 (+)
G34084 NA non-coding downstream 1620495 20071336 ~ 20071564 (+)
AMCG00019376 NA other upstream 997958 17449320 ~ 17452659 (+)
G33406 NA other upstream 2368674 16043942 ~ 16081943 (+)
AMCG00019345 NA other upstream 2823662 15554819 ~ 15626955 (+)
G33283 NA other upstream 3280776 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 3963911 14439253 ~ 14486706 (+)
AMCG00019402 NA other downstream 554183 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 834695 19285536 ~ 19294208 (+)
AMCG00019428 LOC107595150 other downstream 1000406 19451247 ~ 19455137 (+)
G34170 rpl7 other downstream 2156633 20607474 ~ 20610889 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 4164782 22615623 ~ 22643226 (+)

Expression


Co-expression Network