G33812


Basic Information

Item Value
gene id G33812
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 18576495 ~ 18583704 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42339
ttttttttttatttagTGTCCTCGTTACAAAATTTTATTATAGTTTTGAATCAGCCACATAAACAGCATTTACATCCCTGATAAACTCGTCAGTAGTAATATTAATCATTCTCAAATTTggaacagatgagctactgagCCTTTTCTATACAAAACcaatattaataaagaattATGTAATTTAGCACTTTTTATAACTAGATCATAAACAAACCAAAGCCCTGTGATGGCTGTTGACCATTCCAAGAGAAATGGATAACGTTTTGATACCACGTGCTGTGGAGATGACTTCACACTTTGGTAGTATATTCCGAATAAAATGTCTTCAAGGGCTAGTATCCTGACAGTATCCCGAGGTCAAGGTGAGTATTCTGGTCCTCATATTTGGAATACTGCCCAATGTATTGGAATGCCCTGTTGCCATGGAAACGTATTGCATTTGAAAAGGTCATGACCTTTAGCAGTATTACAGGCTGTGGCCCGTGACCACTAGGGGCACTGTAAATCACTAAAAGTTTACAGAAGCACACAATTATGTAAAACCAGCAAGAATTGTGCTATTTTACTAATCAATACTTGaggaatattttgcaaagtCCTGCCAATATAAAAAGTTTTCTGATTTTATAAAAGCCACATTTTAatcaaagaaatacatttgttcaaaGTCTGTGTGATTTCCTGTGTAAATGGGACTGTAGTTGTAGATCAGAGCCTTCTGTTCTGCTTCCTTGTCTGGAAATTGGTGGAAATTTTTCCTTGCTGTAAAAGAAACTGGATCATAATTATTAAGTCTCTAGTCTTTTTTGCAGAACATTGTTAAAAGCACAGATTTatctaaataacaaaacaattggcattaaacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42339 True 867 lncRNA 0.34 2 18576495 18583704

Neighbor

gene id symbol gene type direction distance location
AMCG00019400 nkain4,LOC107724178 coding upstream 51397 18517139 ~ 18525098 (+)
AMCG00019395 LOC102793628,LOC103377196,LOC107098905 coding upstream 198440 18337551 ~ 18378055 (+)
AMCG00019393 chd7,LOC107585562,LOC107688517,LOC107718105,LOC107589837,LOC106568873 coding upstream 280274 18257809 ~ 18296221 (+)
AMCG00019394 NA coding upstream 336882 18231215 ~ 18239613 (+)
AMCG00019389 rab2a coding upstream 369369 18179249 ~ 18207126 (+)
AMCG00019397 LOC107666630,LOC107590209,LOC107586709,LOC107705256,LOC107721902,LOC107663693 coding downstream 24045 18607749 ~ 18661468 (+)
AMCG00019401 bhlhe22 coding downstream 227176 18810880 ~ 18811692 (+)
AMCG00019408 dnajc5b,LOC107656153,LOC107586796,LOC107721861,LOC107663636 coding downstream 498015 19081719 ~ 19089121 (+)
AMCG00019406 trim55b,LOC107586797,LOC107705202,LOC107663638,LOC107656154,LOC107590338,LOC107721936 coding downstream 513032 19096736 ~ 19119509 (+)
AMCG00019411 rrs1,LOC106579528,LOC107590198 coding downstream 605575 19189279 ~ 19190313 (+)
G33810 NA non-coding upstream 125092 18451133 ~ 18451403 (+)
G33809 NA non-coding upstream 125654 18450617 ~ 18450841 (+)
G33800 NA non-coding upstream 138230 18431364 ~ 18438265 (+)
G33796 NA non-coding upstream 176752 18399016 ~ 18399743 (+)
G33795 NA non-coding upstream 180876 18395401 ~ 18395619 (+)
G33874 NA non-coding downstream 343343 18927047 ~ 18927287 (+)
G33913 NA non-coding downstream 623490 19207194 ~ 19209710 (+)
G34084 NA non-coding downstream 1487632 20071336 ~ 20071564 (+)
G34086 NA non-coding downstream 1491474 20075178 ~ 20078454 (+)
G34093 NA non-coding downstream 1511614 20095318 ~ 20096450 (+)
AMCG00019376 NA other upstream 1123836 17449320 ~ 17452659 (+)
G33406 NA other upstream 2494552 16043942 ~ 16081943 (+)
AMCG00019345 NA other upstream 2949540 15554819 ~ 15626955 (+)
G33283 NA other upstream 3406654 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 4089789 14439253 ~ 14486706 (+)
AMCG00019402 NA other downstream 421320 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 701832 19285536 ~ 19294208 (+)
AMCG00019428 LOC107595150 other downstream 867543 19451247 ~ 19455137 (+)
G34170 rpl7 other downstream 2023770 20607474 ~ 20610889 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 4031919 22615623 ~ 22643226 (+)

Expression


Co-expression Network