G34084


Basic Information

Item Value
gene id G34084
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 20071336 ~ 20071564 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42670
GCAGTTTAATGTGAATACAAAGTGTACTGGTAAATATGGAATCTTAAGCAGAAGAACTGGATTCAAAGTACACCACCACACTTGCCTGTTTTTATCACAGTACAGTTCAGtgtttttaccatggtacacAGAACtacacttcattattttatcatgCTACATTACATTTGACCATCTTTTTAACATGGTGCACTACACTATCACATGTAAACCATTTATACTACACTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42670 True 229 lncRNA 0.34 1 20071336 20071564

Neighbor

gene id symbol gene type direction distance location
AMCG00019425 NA coding upstream 193473 19847157 ~ 19877863 (+)
AMCG00019426 NA coding upstream 334466 19726585 ~ 19736870 (+)
AMCG00019422 zgc:162928,c23h8orf34,LOC105890107,LOC107686688,LOC107758299,LOC107585009,LOC107695418 coding upstream 382722 19680768 ~ 19688614 (+)
AMCG00019424 cunh8orf34,zgc:162928,LOC105890107,LOC107741009,LOC107686688,LOC107566197,LOC107758299 coding upstream 406200 19662374 ~ 19665136 (+)
AMCG00019423 prex2,LOC107566194,LOC107741010,LOC107686687,LOC107758281 coding upstream 445532 19614916 ~ 19625804 (+)
AMCG00019433 NA coding downstream 43760 20115324 ~ 20122534 (+)
AMCG00019445 kcnb2,LOC108426548,LOC107657825,LOC107560266 coding downstream 391759 20463323 ~ 20463886 (+)
AMCG00019444 NA coding downstream 472023 20543587 ~ 20545758 (+)
AMCG00019440 NA coding downstream 484143 20555707 ~ 20565280 (+)
AMCG00019441 rdh10,rdh10a coding downstream 540782 20612346 ~ 20626037 (+)
G33913 NA non-coding upstream 861626 19207194 ~ 19209710 (+)
G33874 NA non-coding upstream 1144049 18927047 ~ 18927287 (+)
G33812 NA non-coding upstream 1487632 18576495 ~ 18583704 (+)
G33810 NA non-coding upstream 1619933 18451133 ~ 18451403 (+)
G33809 NA non-coding upstream 1620495 18450617 ~ 18450841 (+)
G34086 NA non-coding downstream 3614 20075178 ~ 20078454 (+)
G34093 NA non-coding downstream 23754 20095318 ~ 20096450 (+)
G34183 NA non-coding downstream 561513 20633077 ~ 20635272 (+)
G34192 NA non-coding downstream 601423 20672987 ~ 20746971 (+)
G34204 NA non-coding downstream 699962 20771526 ~ 20776616 (+)
AMCG00019428 LOC107595150 other upstream 616199 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 777128 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 1049924 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 2618677 17449320 ~ 17452659 (+)
G33406 NA other upstream 3989393 16043942 ~ 16081943 (+)
G34170 rpl7 other downstream 535910 20607474 ~ 20610889 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 2544059 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 3114252 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 3161706 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 3600561 23672125 ~ 23695801 (+)

Expression


Co-expression Network