G34235


Basic Information

Item Value
gene id G34235
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 21090144 ~ 21090416 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42861
tacccgcccactccagctcatccagaactctgcggctcatttggtattctctctgccacgattcgcacacgctaccccactgctccgctccctccactggctcctgataccggcacgcattcagttcaagacattgaccctcacctaccgctgtctcgaccacacagcaccaagctaccttcagaccctcgtctctccatacatcccctccagaccactgcgctcctccagtgccagaagactaactctgcctcctctccactctccttcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42861 True 273 lncRNA 0.58 1 21090144 21090416

Neighbor

gene id symbol gene type direction distance location
AMCG00019454 NA coding upstream 101024 20977933 ~ 20989120 (+)
AMCG00019455 LOC107092069 coding upstream 135098 20952419 ~ 20955046 (+)
AMCG00019453 gdap1 coding upstream 211330 20874430 ~ 20878814 (+)
AMCG00019450 NA coding upstream 311228 20777256 ~ 20778916 (+)
AMCG00019441 rdh10,rdh10a coding upstream 464107 20612346 ~ 20626037 (+)
AMCG00019459 dok6,LOC107741641 coding downstream 110447 21200863 ~ 21209681 (+)
AMCG00019460 NA coding downstream 240846 21331262 ~ 21331771 (+)
AMCG00019464 NA coding downstream 799647 21890063 ~ 21893971 (+)
AMCG00019463 NA coding downstream 804461 21894877 ~ 21899711 (+)
AMCG00019472 neto1,neto1l,LOC107727239,LOC107589957,LOC107662554 coding downstream 1015745 22106161 ~ 22108328 (+)
G34204 NA non-coding upstream 313528 20771526 ~ 20776616 (+)
G34192 NA non-coding upstream 343173 20672987 ~ 20746971 (+)
G34183 NA non-coding upstream 454872 20633077 ~ 20635272 (+)
G34093 NA non-coding upstream 993694 20095318 ~ 20096450 (+)
G34086 NA non-coding upstream 1011690 20075178 ~ 20078454 (+)
G34278 NA non-coding downstream 371266 21461682 ~ 21461891 (+)
G34378 NA non-coding downstream 1485558 22575974 ~ 22577472 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding downstream 1689815 22780231 ~ 22783116 (+)
G34433 NA non-coding downstream 1698592 22789008 ~ 22789463 (+)
G34435 NA non-coding downstream 1708984 22799400 ~ 22799718 (+)
G34170 rpl7 other upstream 479255 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 1635007 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 1795936 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 2068732 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 3637485 17449320 ~ 17452659 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 1525207 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 2095400 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 2142854 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 2581709 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 2955273 24045689 ~ 24086481 (+)

Expression


Co-expression Network