G34278


Basic Information

Item Value
gene id G34278
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 21461682 ~ 21461891 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU42916
cctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccatcaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatgtataacttttttgaaatgcgtttttctggatttttttgttgttattctgtgtctcactgttaaaatacacctacc

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU42916 True 210 lncRNA 0.39 1 21461682 21461891

Neighbor

gene id symbol gene type direction distance location
AMCG00019460 NA coding upstream 129911 21331262 ~ 21331771 (+)
AMCG00019459 dok6,LOC107741641 coding upstream 252001 21200863 ~ 21209681 (+)
AMCG00019454 NA coding upstream 472562 20977933 ~ 20989120 (+)
AMCG00019455 LOC107092069 coding upstream 506636 20952419 ~ 20955046 (+)
AMCG00019453 gdap1 coding upstream 582868 20874430 ~ 20878814 (+)
AMCG00019464 NA coding downstream 428172 21890063 ~ 21893971 (+)
AMCG00019463 NA coding downstream 432986 21894877 ~ 21899711 (+)
AMCG00019472 neto1,neto1l,LOC107727239,LOC107589957,LOC107662554 coding downstream 644270 22106161 ~ 22108328 (+)
AMCG00019471 neto1,neto1l,LOC107727239 coding downstream 710917 22172808 ~ 22184764 (+)
AMCG00019467 LOC107549185,LOC107662560 coding downstream 742774 22204665 ~ 22210456 (+)
G34235 NA non-coding upstream 371266 21090144 ~ 21090416 (+)
G34204 NA non-coding upstream 685066 20771526 ~ 20776616 (+)
G34192 NA non-coding upstream 714711 20672987 ~ 20746971 (+)
G34183 NA non-coding upstream 826410 20633077 ~ 20635272 (+)
G34093 NA non-coding upstream 1365232 20095318 ~ 20096450 (+)
G34378 NA non-coding downstream 1114083 22575974 ~ 22577472 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding downstream 1318340 22780231 ~ 22783116 (+)
G34433 NA non-coding downstream 1327117 22789008 ~ 22789463 (+)
G34435 NA non-coding downstream 1337509 22799400 ~ 22799718 (+)
G34436 LOC107686039,LOC107746909 non-coding downstream 1356252 22818143 ~ 22818460 (+)
G34170 rpl7 other upstream 850793 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 2006545 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 2167474 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 2440270 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 4009023 17449320 ~ 17452659 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 1153732 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 1723925 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 1771379 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 2210234 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 2583798 24045689 ~ 24086481 (+)

Expression


Co-expression Network