G34438


Basic Information

Item Value
gene id G34438
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 22881180 ~ 22888739 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43112
CCTAATCATTATTCTACAGAGCTCTACAGTAAGGAGACCTGACTGCTGCTTTGTCATCCGATCTCCTGAGAGCTCCTTCTGGAGTTCCCCACAATAGCCACCTGGACAGTGTGTAAGCTTGCTGCAGTTCCTTTTGTTGGGAGAAGACTgtgacttgttttttctttttatacaaGAGGTGCTGCAGGTAGGCCGCTGCGTTGGACTGCACTGACGGAAACTGGTGCTGCAACATCTGGATGACTTCGGGGAGCTCCGGGTCTCGCCAGCCAAACTCCctaacacagagagagagacacagggtgTTTAATCAAAACAGGCTCCAATGgaaaaaagctctttgtttaaattaaaaataaattcttaaataacaaaacataagaCATTAAAATATCTACATAATTTGTACATCTGGAACCTTACGCTCTTactcttatttttgtattgtttgagaTGTTGCCCTTTTCATAAATAATGAAGCAGGTTTAAAACTGGTGGAGACAATGCTTGGGAAAACATTTACATGATATCTGGGGACCTCTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43112 True 545 lncRNA 0.42 2 22881180 22888739

Neighbor

gene id symbol gene type direction distance location
AMCG00019477 NA coding upstream 179144 22693692 ~ 22702036 (+)
AMCG00019479 NA coding upstream 192903 22670411 ~ 22688277 (+)
AMCG00019478 ropn1l coding upstream 224271 22644268 ~ 22656909 (+)
AMCG00019470 cct5,LOC107686714,LOC107695377 coding upstream 293046 22582760 ~ 22588134 (+)
AMCG00019469 sema5a,LOC108426609,LOC106578437 coding upstream 426651 22390170 ~ 22454529 (+)
AMCG00019488 NA coding downstream 677842 23566581 ~ 23575527 (+)
AMCG00019494 NA coding downstream 1206556 24095295 ~ 24102633 (+)
AMCG00019493 NA coding downstream 1220223 24108962 ~ 24149017 (+)
AMCG00019495 NA coding downstream 1264758 24153497 ~ 24178723 (+)
AMCG00019499 NA coding downstream 1291456 24180195 ~ 24182210 (+)
G34436 LOC107686039,LOC107746909 non-coding upstream 62720 22818143 ~ 22818460 (+)
G34435 NA non-coding upstream 81462 22799400 ~ 22799718 (+)
G34433 NA non-coding upstream 91717 22789008 ~ 22789463 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding upstream 98064 22780231 ~ 22783116 (+)
G34378 NA non-coding upstream 303708 22575974 ~ 22577472 (+)
G34445 LOC107590286,LOC107591257,LOC107701635,LOC108438556 non-coding downstream 40281 22929020 ~ 22929310 (+)
G34446 NA non-coding downstream 74718 22963457 ~ 22963998 (+)
G34457 NA non-coding downstream 321516 23210255 ~ 23286978 (+)
G34509 zfhx4,LOC107705239,LOC107666618,LOC107586695 non-coding downstream 765688 23654427 ~ 23654645 (+)
G34510 zfhx4,LOC107586695 non-coding downstream 781843 23670582 ~ 23671043 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other upstream 237954 22615623 ~ 22643226 (+)
G34170 rpl7 other upstream 2270291 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 3426043 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 3586972 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 3859768 19005024 ~ 19021412 (+)
AMCG00019481 NA other downstream 297077 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 344531 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 783386 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 1156950 24045689 ~ 24086481 (+)
AMCG00019496 NA other downstream 1327138 24215877 ~ 24219991 (+)

Expression


Co-expression Network