G34476


Basic Information

Item Value
gene id G34476
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 23210241 ~ 23286999 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43155
agactgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttacacttgcccatttttcctgcttctaacacataaaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgaccggtgccatgataacgagattataagtgttattcacttcacctgtcagcggtcataatgttacggctgatcggtgtatatatgtgtgatttacagtgagaaataaattaatgaaaacacacgtgatggtgttttttaaaattaatatacagtatatgtatttactgaaaacaagaagatTCATAACCCGCATTTATTAGAGACCGCCTTTAGTGTACCTGATTATGCAGATCAACCCAGCGACTGTTGGAGACCGGCTGCTATTTGCTATTTCGAGAATTGCAAGTCTCTTCTGCTGTGCATTCCAGGTGTAGAACAATAAAAGAGGACAAACTGCACCTAGACATAGGTTTGAAGTACTGCTGGAGATaaccttttaaatgtgttaaaatggtTTGTGGGTTACAGGTTGGTATTTCACATGTTTATGCAAGTAGAACACTGTTAATGCTGTTAAACCCTGTTTTAAGGTACAGCTTGTTTTGTCTGAAGATCAATCTGACATGGTTGCTTAATCTTGAAGTAATGTGCATGCAACGCATATTCAAATAATTACCTAATTAATTTGTGTATCCTAAATAAGTGGTATATTTTGATGTCACATATATGTCcttgtgtctttatttattctgtttgtgaataataatatgtatttaatcctTATGGCAGTCTAAGCAGACCTACTTTGAAAGACTAAAACCCTGTCAGACTGCTCACCTGtagttttaaatcaaacacctgccataaaaaatgtaattaattaacagGATAATAAAGTAAGCTGTAGCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43155 True 976 lncRNA 0.37 2 23210241 23286999

Neighbor

gene id symbol gene type direction distance location
AMCG00019483 NA coding downstream 235113 22955778 ~ 22975128 (-)
AMCG00019485 ctnnd2,LOC102780722,LOC100711149 coding downstream 321769 22877285 ~ 22888472 (-)
AMCG00019484 ctnnd2a,LOC108438556,LOC106569223 coding downstream 365702 22830147 ~ 22844539 (-)
AMCG00019486 NA coding downstream 566689 22642650 ~ 22643552 (-)
AMCG00019476 NA coding downstream 619586 22588533 ~ 22590655 (-)
AMCG00019490 LOC106578414 coding upstream 327128 23614127 ~ 23619816 (-)
AMCG00019491 zfhx4 coding upstream 333149 23620148 ~ 23622993 (-)
AMCG00019489 zfhx4,LOC107721891,LOC107590192 coding upstream 383531 23670530 ~ 23674685 (-)
AMCG00019501 hnf4g coding upstream 714201 24001200 ~ 24011054 (-)
AMCG00019502 NA coding upstream 932090 24219089 ~ 24466531 (-)
G34468 LOC103376870 non-coding downstream 89281 23118801 ~ 23120960 (-)
G34283 LOC102215562 non-coding downstream 1663717 21546208 ~ 21546524 (-)
G34277 NA non-coding downstream 1772085 21437915 ~ 21438156 (-)
G34148 NA non-coding downstream 2660541 20478257 ~ 20549700 (-)
G34006 NA non-coding downstream 3729273 19467076 ~ 19480968 (-)
G34502 NA non-coding upstream 289528 23576527 ~ 23578285 (-)
G34514 NA non-coding upstream 323430 23610429 ~ 23642241 (-)
G34541 NA non-coding upstream 611274 23898273 ~ 23947457 (-)
G34596 NA non-coding upstream 859195 24146194 ~ 24146851 (-)
G34763 LOC107656144 non-coding upstream 2225085 25512084 ~ 25515224 (-)
G34470 NA other downstream 10633 23147861 ~ 23199608 (-)
AMCG00019487 NA other downstream 466059 22670647 ~ 22744182 (-)
AMCG00019446 ube2w other downstream 2444745 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 3755272 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 3908694 19294812 ~ 19301547 (-)
AMCG00019500 pign other upstream 765012 24052011 ~ 24094664 (-)
G35067 NA other upstream 6230997 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 6248745 29535744 ~ 29550162 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other upstream 6351567 29638566 ~ 29645963 (-)
G35101 NA other upstream 6392230 29679229 ~ 29685302 (-)

Expression


Co-expression Network