G34581


Basic Information

Item Value
gene id G34581
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 24145139 ~ 24145909 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43272
tgcagtatatattttttatttaacattacaaGTTATAAAAAACTCAACGGATGGTGgattacattaaatgcaatataattatTCTGTTACGTGAGTTTTTCAAAGTTGTCAGAAAACACACcaatttgaaaaaaacactATAAACCAGATACaaggcagaaaataaatataaaagaagcAGAGCATTAGAAACATGGTTTAAGTACACAAGTGTTCTCCACTTTTATTACTTCATGACATTTacttcaaatttacattatatggGCACCATCCTAATAATTCAGTGTATTATACAGATATTTACTTTTAGAACAAATgcaaaatccaaacaaaataaagaatccCAAAATATTACCACCCACTgttagaataaaaaaacaaaaacaaacaggagaCACTGCAACACAAAATTAGCACAGGACAGGTAGgaacttgatttaaaaaaaaaaaaaaaaaaaggggaagtGGGTAAACAATTATATGAAGTGCAAATTTCTTTGGAGTTTGGAATAAAATGGTAACAAaggaatataaattaaaaataaaacacaaaaagaccaaaaaaaaaaaggcaatgatTGACTTCAAGTATGAGGTGGTAAGGTGTGGGCAGTCCTTCCTAGTGTCAAGCTGGGCCGGGCTATTTTTTTCGCTGGAACACATTGGCCAGCATGGCTCCTGAGGTGGTCAGCTGCCCCATCTTGTTTAGGAACTTGGTCTTTGCATCTTCACTCACAAGACTAGCAGCAATTGACATTGAACTTCAAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43272 True 771 lncRNA 0.33 1 24145139 24145909

Neighbor

gene id symbol gene type direction distance location
AMCG00019494 NA coding upstream 42506 24095295 ~ 24102633 (+)
AMCG00019488 NA coding upstream 569612 23566581 ~ 23575527 (+)
AMCG00019477 NA coding upstream 1443103 22693692 ~ 22702036 (+)
AMCG00019479 NA coding upstream 1456862 22670411 ~ 22688277 (+)
AMCG00019478 ropn1l coding upstream 1488230 22644268 ~ 22656909 (+)
AMCG00019495 NA coding downstream 7588 24153497 ~ 24178723 (+)
AMCG00019499 NA coding downstream 34286 24180195 ~ 24182210 (+)
AMCG00019498 NA coding downstream 39763 24185672 ~ 24191616 (+)
AMCG00019497 NA coding downstream 62658 24208567 ~ 24215367 (+)
AMCG00019503 cntnap2,LOC107595149 coding downstream 600568 24746477 ~ 24759304 (+)
G34510 zfhx4,LOC107586695 non-coding upstream 474096 23670582 ~ 23671043 (+)
G34509 zfhx4,LOC107705239,LOC107666618,LOC107586695 non-coding upstream 490494 23654427 ~ 23654645 (+)
G34457 NA non-coding upstream 858161 23210255 ~ 23286978 (+)
G34446 NA non-coding upstream 1181141 22963457 ~ 22963998 (+)
G34445 LOC107590286,LOC107591257,LOC107701635,LOC108438556 non-coding upstream 1215829 22929020 ~ 22929310 (+)
G34621 NA non-coding downstream 93507 24239416 ~ 24239813 (+)
G34632 NA non-coding downstream 181531 24327440 ~ 24328019 (+)
G34695 NA non-coding downstream 956480 25102389 ~ 25103872 (+)
G34704 NA non-coding downstream 975261 25121170 ~ 25121378 (+)
G34742 anks6 non-coding downstream 1196352 25342261 ~ 25347728 (+)
AMCG00019492 NA other upstream 58658 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 449338 23672125 ~ 23695801 (+)
AMCG00019480 NA other upstream 897040 23233270 ~ 23248099 (+)
AMCG00019481 NA other upstream 940889 23185816 ~ 23204250 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other upstream 1501913 22615623 ~ 22643226 (+)
AMCG00019496 NA other downstream 69968 24215877 ~ 24219991 (+)
AMCG00019535 NA other downstream 4467346 28613255 ~ 28710887 (+)
AMCG00019551 lsm5 other downstream 5155046 29300955 ~ 29305006 (+)
AMCG00019605 NA other downstream 8164128 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 8178491 32324400 ~ 32392976 (+)

Expression


Co-expression Network