G34596


Basic Information

Item Value
gene id G34596
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 24146194 ~ 24146851 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43287
ataggatccttggatcacttagatactaatggacaccaaacgagcacaatgggtcgaatgtcctcatttgtaaactttgttcttctAATCGGTACTGGATTGTAAATCTGTTTTAGCATCGGCCTTAAGTAGTTAACAACTGTGAGGCTGTTTAAGTGTCTGCTGTGTTAGGATACATCTGGCTGTCAGTCACTtcaattgaataataaaattgaaaaccaACAGATTTTTCAGCTTGACATTTTGCTCAGTGCTGGAATGCTGCAATAGTAAACTAGAATTATCAGGTATAACCTCAGACTGATAGACATATAGGAAATTGTAAAAGTAGAGTAGTACAGAGATGTCATttcatatgaataaaataagtcaTGTGTGAGCAAGTCATAGTACAGGAGTGAGTAACACTGACAAGCACTCGGGTCATTTTCTctcaaattctctttgtttgtgCCAGTATCCCCGCCCTGTGGTTTTGGATAATTCAATGTTCTACTCCTTTTCTATATATATGAGGCACAACTGCTAATTTCCTTTTCAGAGCAAGACTACCAGCTTGTCAgtcattttcttctcctttgtGCTTATTTAACGAATGTTTAGTTCTGTTACAAATTTCTTTGAGCATCTTTGTGTTActgttaatttcaaaataatt

Function

GO:

id name namespace
GO:0004962 endothelin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43287 True 658 lncRNA 0.36 1 24146194 24146851

Neighbor

gene id symbol gene type direction distance location
AMCG00019501 hnf4g coding downstream 135140 24001200 ~ 24011054 (-)
AMCG00019489 zfhx4,LOC107721891,LOC107590192 coding downstream 471509 23670530 ~ 23674685 (-)
AMCG00019491 zfhx4 coding downstream 523201 23620148 ~ 23622993 (-)
AMCG00019490 LOC106578414 coding downstream 526378 23614127 ~ 23619816 (-)
AMCG00019482 NA coding downstream 919798 23212063 ~ 23226396 (-)
AMCG00019502 NA coding upstream 72238 24219089 ~ 24466531 (-)
AMCG00019510 ezh2 coding upstream 918695 25065546 ~ 25080710 (-)
AMCG00019511 pdia4,LOC107727231,LOC107741760,LOC107686698,LOC107695410 coding upstream 951503 25098354 ~ 25102573 (-)
AMCG00019512 NA coding upstream 959441 25106292 ~ 25139317 (-)
AMCG00019509 hus1 coding upstream 1006006 25152857 ~ 25158446 (-)
G34541 NA non-coding downstream 198737 23898273 ~ 23947457 (-)
G34514 NA non-coding downstream 503953 23610429 ~ 23642241 (-)
G34502 NA non-coding downstream 567909 23576527 ~ 23578285 (-)
G34476 NA non-coding downstream 859195 23210241 ~ 23286999 (-)
G34468 LOC103376870 non-coding downstream 1025234 23118801 ~ 23120960 (-)
G34763 LOC107656144 non-coding upstream 1365233 25512084 ~ 25515224 (-)
G34831 NA non-coding upstream 1668842 25815693 ~ 25816056 (-)
G34846 NA non-coding upstream 2026211 26173062 ~ 26211553 (-)
G34853 NA non-coding upstream 2145504 26292355 ~ 26336737 (-)
G34859 NA non-coding upstream 2230266 26377117 ~ 26377354 (-)
AMCG00019500 pign other downstream 51530 24052011 ~ 24094664 (-)
G34470 NA other downstream 946586 23147861 ~ 23199608 (-)
AMCG00019487 NA other downstream 1402012 22670647 ~ 22744182 (-)
AMCG00019446 ube2w other downstream 3380698 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 4691225 19442395 ~ 19454969 (-)
G35067 NA other upstream 5371145 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 5388893 29535744 ~ 29550162 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other upstream 5491715 29638566 ~ 29645963 (-)
G35101 NA other upstream 5532378 29679229 ~ 29685302 (-)
AMCG00019597 NA other upstream 7275178 31422029 ~ 31427583 (-)

Expression


Co-expression Network