G34621


Basic Information

Item Value
gene id G34621
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 24239416 ~ 24239813 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43312
gtgtgtgtgtgtgtgagagtgagtgtgtgtgtgtgagtgtgtgtgtgagtgtgtgtgtgagtgagtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgagtgtgtgcgagtgtgtgtgtgttggtgactgtgtgtgtgtgtgagtgtgtgagtgtgtgtgagagtgtgagtgagtgtgtgtgtgagtgtgtgtgtgtgtgagtgtgtgtgtgttggtgaatgtgtgtgagtgtgtgtgtgttggtgagtgtgtgtgtgactgtgtgtgtgtgtgtgtgtgtgtgtgactgtgtgtgtgtgagagttgtgtgtgttggtgtgtgtgagagtgtgtgtgtgttggtgtgtgtgagtgtgtgtgagtgagtctgtgaatgagtg

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43312 True 398 lncRNA 0.50 1 24239416 24239813

Neighbor

gene id symbol gene type direction distance location
AMCG00019497 NA coding upstream 24049 24208567 ~ 24215367 (+)
AMCG00019498 NA coding upstream 47800 24185672 ~ 24191616 (+)
AMCG00019499 NA coding upstream 57206 24180195 ~ 24182210 (+)
AMCG00019495 NA coding upstream 60693 24153497 ~ 24178723 (+)
AMCG00019493 NA coding upstream 90399 24108962 ~ 24149017 (+)
AMCG00019503 cntnap2,LOC107595149 coding downstream 506664 24746477 ~ 24759304 (+)
AMCG00019505 cntnap2a,cntnap2,LOC107595149 coding downstream 570738 24810551 ~ 24880556 (+)
AMCG00019504 NA coding downstream 709638 24949451 ~ 24952124 (+)
AMCG00019506 cntnap2,cntnap2a,LOC107695381,LOC107741949,LOC107686721 coding downstream 744615 24984428 ~ 24990342 (+)
AMCG00019507 cul1a,LOC106599302,LOC105024245,LOC106569218,LOC108433080,LOC107663526,LOC107656141,LOC108280768 coding downstream 788781 25028594 ~ 25063574 (+)
G34581 NA non-coding upstream 93507 24145139 ~ 24145909 (+)
G34510 zfhx4,LOC107586695 non-coding upstream 568373 23670582 ~ 23671043 (+)
G34509 zfhx4,LOC107705239,LOC107666618,LOC107586695 non-coding upstream 584771 23654427 ~ 23654645 (+)
G34457 NA non-coding upstream 952438 23210255 ~ 23286978 (+)
G34446 NA non-coding upstream 1275418 22963457 ~ 22963998 (+)
G34632 NA non-coding downstream 87627 24327440 ~ 24328019 (+)
G34695 NA non-coding downstream 862576 25102389 ~ 25103872 (+)
G34704 NA non-coding downstream 881357 25121170 ~ 25121378 (+)
G34742 anks6 non-coding downstream 1102448 25342261 ~ 25347728 (+)
G34834 NA non-coding downstream 2011611 26251424 ~ 26344732 (+)
AMCG00019496 NA other upstream 19425 24215877 ~ 24219991 (+)
AMCG00019492 NA other upstream 152935 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 543615 23672125 ~ 23695801 (+)
AMCG00019480 NA other upstream 991317 23233270 ~ 23248099 (+)
AMCG00019481 NA other upstream 1035166 23185816 ~ 23204250 (+)
AMCG00019535 NA other downstream 4373442 28613255 ~ 28710887 (+)
AMCG00019551 lsm5 other downstream 5061142 29300955 ~ 29305006 (+)
AMCG00019605 NA other downstream 8070224 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 8084587 32324400 ~ 32392976 (+)
AMCG00019638 LOC107757182 other downstream 10214396 34454209 ~ 34578440 (+)

Expression


Co-expression Network