G34763 (LOC107656144)


Basic Information

Item Value
gene id G34763
gene name LOC107656144
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 25512084 ~ 25515224 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43480
CTGTAATCTTCTCTGTTTAAGCAATTTTGATTCTCTCATTAAGAATCCTTTCACTTTGGACTCCATATAACAGCACTGAAGGATCTCAAAGTCACTGAATCCAGCAAACAGAGAGGAGATAAAGCACAAACATGGATGGacaaaagcaattttattttccactaaggaacaaaatgtttcagaaacGTCATGTACATGCACTGagagttttcctttttattcctcaaaagcatttcaaaatgtgcctttttaCAGGGTGGATGTGAAGTCACATATGAAAAAGGCAATGCTGCACAATGTGTGTTCTCTGTACATCAAGTATCAAACGTTAACATGTTATcaagacaacacaaaaaacaacagcacgTCCCAGAACTGTTATTTGGCAAAGGTATTACACATTCTTGCGCCTCTCCTCTTCCCGATTCATCTTTCAGTTCAAagtgcatacaaaaatacaattcatttaAACCTGCGTGTTCCCCCGTGCTTCATACAGGCCTGGTGCAGTCTCGTTTATTTGAGTAGTTTAGGCACTGTCATACTCGGAACAGTTATATCCCTGAAGATGGGCTGTATGTTCGCAGTTGACGCGGGCCTGTTTTGATTcagagtttcaatgatcatctGCCTCATGTCCCGACTGGCATCCCCTCGCACAGCCAGCAAGGCCGTGATGTGTTCTTCCCTGACATCGGGGTATCTGGAGACGAGTGTCGATACTTCCAGGTACAGTAGGGTGGGGTCTGTGAGTTTGAACACTTCGGCTATGGCAGCAATGGCATCGCACAGACTGTCAGCGGCCTCGCCATCTGAGAGTTTCCTGAATAGGAATTTCAATTGATCCGCTTCCTTGATCATTCTCTCCGCTCCCTCTTTCCGTTCTTCGGCATTTCTGAAGGAGATCCTTTTCTGCATTATAGCCTTTAAGTACTCGATGACCACTCTGCGATGAGCCTCCGTAGTTATCTCctgaaacaaatcaaagaccGTCCCATCGATCTGACAATGACGACAATAAACTGGAGGGAGAATTGTGGCAGAAAACATTAGGTCAATACTTTCGGACCGAGGGCATGATGGGAGTTCAGATTTGAATGGAATggtaacaaacacattttaaacagcttGCCTTATTGTATGGCTTCTTGATCTTAGCAAAATCATAGAAGTAATCCTCCACAGTCGCACAAATGGTGTCCACTGCATTAGATCCCGACAGCCACTTCCTGGTCAACAGCTCATTAAGATGTTGCTGTGAAGAGAAAGATATTTATAATACCATCAAAGTCCACCTCAAGGGAAcagaagaaatatattattttagggGATAAAAATAAGCCCGGTCCATGTTGCGTTTATTAAATC

Function

NR:

description
PREDICTED: exocyst complex component 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43480 True 1368 lncRNA 0.43 3 25512084 25515224

Neighbor

gene id symbol gene type direction distance location
AMCG00019509 hus1 coding downstream 353638 25152857 ~ 25158446 (-)
AMCG00019512 NA coding downstream 372767 25106292 ~ 25139317 (-)
AMCG00019511 pdia4,LOC107727231,LOC107741760,LOC107686698,LOC107695410 coding downstream 409511 25098354 ~ 25102573 (-)
AMCG00019510 ezh2 coding downstream 431374 25065546 ~ 25080710 (-)
AMCG00019502 NA coding downstream 1045553 24219089 ~ 24466531 (-)
AMCG00019521 NA coding upstream 3803 25519027 ~ 25522993 (-)
AMCG00019524 LOC105920200 coding upstream 89678 25604902 ~ 25613129 (-)
AMCG00019525 NA coding upstream 116473 25631697 ~ 25639027 (-)
AMCG00019527 NA coding upstream 1837993 27353217 ~ 27379929 (-)
AMCG00019536 drosha,rnasen,LOC107556767 coding upstream 3144793 28660017 ~ 28711602 (-)
G34596 NA non-coding downstream 1365233 24146194 ~ 24146851 (-)
G34541 NA non-coding downstream 1564627 23898273 ~ 23947457 (-)
G34514 NA non-coding downstream 1869843 23610429 ~ 23642241 (-)
G34502 NA non-coding downstream 1933799 23576527 ~ 23578285 (-)
G34476 NA non-coding downstream 2225085 23210241 ~ 23286999 (-)
G34831 NA non-coding upstream 300469 25815693 ~ 25816056 (-)
G34846 NA non-coding upstream 657838 26173062 ~ 26211553 (-)
G34853 NA non-coding upstream 777131 26292355 ~ 26336737 (-)
G34859 NA non-coding upstream 861893 26377117 ~ 26377354 (-)
G34868 NA non-coding upstream 1155681 26670905 ~ 26676220 (-)
AMCG00019500 pign other downstream 1417420 24052011 ~ 24094664 (-)
G34470 NA other downstream 2312476 23147861 ~ 23199608 (-)
AMCG00019487 NA other downstream 2767902 22670647 ~ 22744182 (-)
AMCG00019446 ube2w other downstream 4746588 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 6057115 19442395 ~ 19454969 (-)
G35067 NA other upstream 4002772 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 4020520 29535744 ~ 29550162 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other upstream 4123342 29638566 ~ 29645963 (-)
G35101 NA other upstream 4164005 29679229 ~ 29685302 (-)
AMCG00019597 NA other upstream 5906805 31422029 ~ 31427583 (-)

Expression


Co-expression Network