G34893


Basic Information

Item Value
gene id G34893
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 27118524 ~ 27156206 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43634
caaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaataacaacaaaaaaatccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagtgaaataagtatttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacatttggcaactcgaaccttcagctccctccacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43634 True 335 lncRNA 0.40 2 27118524 27156206

Neighbor

gene id symbol gene type direction distance location
AMCG00019530 NA coding upstream 160935 26952697 ~ 26957589 (+)
AMCG00019531 LOC106578564,LOC106590046 coding upstream 217795 26897667 ~ 26900729 (+)
AMCG00019528 cdh18,LOC102798556,LOC102310872 coding upstream 261500 26849325 ~ 26857024 (+)
AMCG00019526 NA coding upstream 924998 26170249 ~ 26193526 (+)
AMCG00019523 bmp6,LOC107664667,LOC107678510,LOC107730008,LOC107382712,LOC106530850 coding upstream 1517079 25587990 ~ 25601445 (+)
AMCG00019529 NA coding downstream 123514 27279720 ~ 27282910 (+)
AMCG00019533 NA coding downstream 878478 28034684 ~ 28034998 (+)
AMCG00019532 NA coding downstream 878804 28035010 ~ 28035417 (+)
AMCG00019534 LOC107714825 coding downstream 1556598 28712804 ~ 28730320 (+)
AMCG00019537 NA coding downstream 1670147 28826353 ~ 28889651 (+)
G34863 NA non-coding upstream 602608 26515645 ~ 26515916 (+)
G34834 NA non-coding upstream 773792 26251424 ~ 26344732 (+)
G34838 NA non-coding upstream 818172 26298521 ~ 26300352 (+)
G34742 anks6 non-coding upstream 1770796 25342261 ~ 25347728 (+)
G34704 NA non-coding upstream 1997146 25121170 ~ 25121378 (+)
G34912 NA non-coding downstream 324115 27480321 ~ 27480677 (+)
G34916 NA non-coding downstream 571211 27727417 ~ 27727643 (+)
G34921 NA non-coding downstream 604082 27760288 ~ 27760653 (+)
G34926 NA non-coding downstream 800561 27956767 ~ 27956966 (+)
G34930 NA non-coding downstream 1018466 28174672 ~ 28193989 (+)
AMCG00019496 NA other upstream 2898533 24215877 ~ 24219991 (+)
AMCG00019492 NA other upstream 3032043 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 3422723 23672125 ~ 23695801 (+)
AMCG00019480 NA other upstream 3870425 23233270 ~ 23248099 (+)
AMCG00019481 NA other upstream 3914274 23185816 ~ 23204250 (+)
AMCG00019535 NA other downstream 1457049 28613255 ~ 28710887 (+)
AMCG00019551 lsm5 other downstream 2144749 29300955 ~ 29305006 (+)
AMCG00019605 NA other downstream 5153831 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 5168194 32324400 ~ 32392976 (+)
AMCG00019638 LOC107757182 other downstream 7298003 34454209 ~ 34578440 (+)

Expression


Co-expression Network