G34968


Basic Information

Item Value
gene id G34968
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 28640232 ~ 28647267 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43722
ATTTAAATGACAGTTCTAAAGGGATATCATTTAACATACAGCTAAACTAATCATTGCATCACCAAatatttttgcttattttactttaatgtaaAGTGCATGAAATAATTTCCCTGGAACTTCTATCCCCCCCCCATTTCTTTCAGGACGCTACAAACAGTGGGTCCCTCACATGCTCGAACATACACAGTTGCAGTTTACTTCAAGGGAGAGAGAATCGGATGTGGGAAAGGACCAAGtattcaGCAAGCTGAAATGGGAGCTGCAATGGATGCACTGGAAAAATATAACTTTCCCCAGATGGCTCATCAGAAGCGCTTCATTGAGCGGAAATACAGGCAAGAGCTAAAAGAAAtgagacgagagagagagaggcaggaaaAGGAGTCTGATGAGACTGAGGAGAGCAGAAAGTAAAAAGTGCCCTGGAAGTGTGCAAGTTCCCGGGATTCATGAACTACAGCCAGCACCGGGACAATTCAAAGCATGTGTGTCCAGACAAAAGGGAAGCTGTGGAACACATTCAGAGGAGTAGGTGGAGGCTCGATCCAGCAAATGCTGCAACGTTTGTTATCATTCtgttttttactattttattgtagtttgttttaatcagtgagtttttgtcttgttattttccagtgttgtgtttttagtGTCGGTACttaattagtattttaaattatgttcttTCTAAATACTCACTTGCATAATAAATCTTAGTCTTGAAGTCTtttactctttttttctttctatcccTTGAACTTATTTTCTGTACTGAAGATAAACATGTGCTCCTTCCTGAGAGTAAATATTAGCCATTTTGTGCCaccttttcaatttatttttattattaataatttataaagtcTTAGATGTGCATAGTGGCCTGTATAgcaaaagaaaactgaacacaaatacAGAACTGTTACTATACTCTTAGTGCAAAggttaactgaaaaataaagcacacacaatggaaataaaacacCAAAGACATGTCAACCTTAACCATAGGAAGTGTCACTGAAATTGTTTTTGCTATGATGTTGTAATAGTATTGCTATTAATTCTAAAAACGGTAATAACAGAAAACCTACTTGATATTTATTACAAGAATGTCACTTGAATTTAAAGTGTGTTAAAGGGATATGAACACATAAGGTACACATAAGTTGAAATAATGCTTGTTAGTCACCTTTGTGATTTATACAtagcagattttaaaaatactttgttgtaatgtacttttaataaagaaataatgcatGCTATTCTTACCTGGTAAGATATTGAAAAGGAAACCATTCTACCATCTTGCTAGAAACAATTGTTTCTGGTTGACATTAGCAAATGTTTGGGACCTCCATAGTTAAATTTgtcaattaaaagtaattaagatTACAGGTATACATTAGAAGCTCTTTGAAATTGGCCAAATTGAAATAAGGCAACTGTAGAAGTGCTATACTTTTGAAGGAAATATTGTAAGACTGTTACTCTCTACCATCATGCTAGCGTGAAAATGACTGATTGTGATATGATGGGTATTCATGAATAAATTAACAAGTTTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43722 True 1576 lncRNA 0.35 3 28640232 28647267

Neighbor

gene id symbol gene type direction distance location
AMCG00019527 NA coding downstream 1260303 27353217 ~ 27379929 (-)
AMCG00019525 NA coding downstream 3001205 25631697 ~ 25639027 (-)
AMCG00019524 LOC105920200 coding downstream 3027103 25604902 ~ 25613129 (-)
AMCG00019521 NA coding downstream 3117239 25519027 ~ 25522993 (-)
AMCG00019509 hus1 coding downstream 3481786 25152857 ~ 25158446 (-)
AMCG00019536 drosha,rnasen,LOC107556767 coding upstream 12750 28660017 ~ 28711602 (-)
AMCG00019541 NA coding upstream 70813 28718080 ~ 28826591 (-)
AMCG00019540 NA coding upstream 508070 29155337 ~ 29155822 (-)
AMCG00019539 NA coding upstream 601297 29248564 ~ 29260695 (-)
AMCG00019543 NA coding upstream 631530 29278797 ~ 29300537 (-)
G34933 NA non-coding downstream 427843 28212139 ~ 28212389 (-)
G34931 NA non-coding downstream 446233 28192767 ~ 28193999 (-)
G34929 NA non-coding downstream 672842 27967154 ~ 27967390 (-)
G34905 NA non-coding downstream 1239145 27350207 ~ 27401087 (-)
G34868 NA non-coding downstream 1964012 26670905 ~ 26676220 (-)
G35002 NA non-coding upstream 178053 28825320 ~ 28825668 (-)
G35014 NA non-coding upstream 302700 28949967 ~ 28950230 (-)
G35083 NA non-coding upstream 984927 29632194 ~ 29633736 (-)
G35111 NA non-coding upstream 1071078 29718345 ~ 29731767 (-)
G35129 NA non-coding upstream 1124319 29771586 ~ 29772192 (-)
AMCG00019500 pign other downstream 4545568 24052011 ~ 24094664 (-)
G34470 NA other downstream 5440624 23147861 ~ 23199608 (-)
AMCG00019487 NA other downstream 5896050 22670647 ~ 22744182 (-)
AMCG00019446 ube2w other downstream 7874736 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 9185263 19442395 ~ 19454969 (-)
G35067 NA other upstream 870729 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 888477 29535744 ~ 29550162 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other upstream 991299 29638566 ~ 29645963 (-)
G35101 NA other upstream 1031962 29679229 ~ 29685302 (-)
AMCG00019597 NA other upstream 2774762 31422029 ~ 31427583 (-)

Expression


Co-expression Network