G35101


Basic Information

Item Value
gene id G35101
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 29679229 ~ 29685302 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43881
CGAGTTTGGTTGTGGAGAAGAAGTCTAGGATAAACAGATTGAGAATCATGTGACAGTTTGTGATCAGAATGAGAAAGGAAGGAAGTAAAACCTTACCTGTGCTATGAAGACTCAGAAGTATATCCAAAAATGACACTTCTGTCATTATGACAATCTGTCTTGAAGCAAACCCTGAGCAAagCTTTTAAAGAGAAGATGGAAAGCCTTAGCACAACACCAGATTATCATACACATGCACCAGACTACTATGATGATGACTACATTGATGATTTGTGCCACAATGAAGGTATCATCAGTGTTGGGGCTGTTGTGACAACGGTTTTTTTCACTGTAGTGATTGTTTTGAGTCTTCTAGGAAATCTTCTGGTCCTGGGGATCCTGATCAAATATGAAAATCTCAGATCTGTCACAAATACATTCATTCTAAACCTCGCTCTGTCAGATTTGATATTCACTTTTGGATTGCCTTTTTGGGCCCATTACCATACAGCAGGTTGGACGTTTGATACATCTCTGTGCAAAGTCATCAGCTTTATTTTCCAAGTTGGCTTTTACAGTGGTATTATATTCCTAACAATGATGACCATCCATCGTTATATAGCAGTAGTTCATCCATTATATGATCTTGGCTCCAGAAAGTGGTGCTATGGCATGAGTGCTTCTGTGATCATTTGGATTGTGAGTTTCTTAGCAGCACTCCCTGGATATATGTACCATGAAGTCCAATTACATGATAAAAATATGCACTGTGAGTATAATGACATGAAATGGAAACACATTGGAGTGTATCAGCAAAATGCCTTCTTCTTAGTTGCCTTATGTGTGATTGtattctgttattttcaaatactCAAGAC

Function

GO:

id name namespace
GO:0002376 immune system process biological_process
GO:0008233 peptidase activity molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU43881 True 857 TUCP 0.38 3 29679229 29685302

Neighbor

gene id symbol gene type direction distance location
AMCG00019546 NA coding downstream 237452 29440921 ~ 29441777 (-)
AMCG00019544 NA coding downstream 274207 29404063 ~ 29405022 (-)
AMCG00019545 NA coding downstream 275231 29403341 ~ 29403998 (-)
AMCG00019543 NA coding downstream 378692 29278797 ~ 29300537 (-)
AMCG00019539 NA coding downstream 418534 29248564 ~ 29260695 (-)
AMCG00019557 NA coding upstream 76027 29761329 ~ 29766606 (-)
AMCG00019555 wrnip1,LOC103135799,LOC106941779 coding upstream 88383 29773685 ~ 29785242 (-)
AMCG00019564 foxc1,foxc1a,LOC103370816,LOC104941097,LOC106532673 coding upstream 451429 30136731 ~ 30138161 (-)
AMCG00019563 foxf2,LOC102792585 coding upstream 482213 30167515 ~ 30172280 (-)
AMCG00019566 NA coding upstream 498213 30183515 ~ 30184507 (-)
G35083 NA non-coding downstream 45493 29632194 ~ 29633736 (-)
G35014 NA non-coding downstream 728999 28949967 ~ 28950230 (-)
G35002 NA non-coding downstream 853561 28825320 ~ 28825668 (-)
G34968 NA non-coding downstream 1031962 28640232 ~ 28647267 (-)
G34933 NA non-coding downstream 1466840 28212139 ~ 28212389 (-)
G35111 NA non-coding upstream 33043 29718345 ~ 29731767 (-)
G35129 NA non-coding upstream 86284 29771586 ~ 29772192 (-)
G35144 NA non-coding upstream 141355 29826657 ~ 29828650 (-)
G35145 NA non-coding upstream 162342 29847644 ~ 29847858 (-)
G35157 gmds,LOC107721371,LOC107556133 non-coding upstream 396348 30081650 ~ 30126330 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 33266 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 129067 29535744 ~ 29550162 (-)
G35067 NA other downstream 157245 29517996 ~ 29521984 (-)
AMCG00019500 pign other downstream 5584565 24052011 ~ 24094664 (-)
G34470 NA other downstream 6479621 23147861 ~ 23199608 (-)
AMCG00019597 NA other upstream 1736727 31422029 ~ 31427583 (-)
G35476 LOC107575789 other upstream 2536762 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 4825431 34510733 ~ 34522270 (-)
G35867 NA other upstream 5369717 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 6249494 35934796 ~ 35981536 (-)

Expression


Co-expression Network