G35129


Basic Information

Item Value
gene id G35129
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 29771586 ~ 29772192 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43922
gtctgtgtttttagttatttttagaaaactTATATGGAGTTTTAATTTAACACTCATTAAATTATTGCAAACTGAATTCTGTAATAAACAAATTGGTGATAAATTGTTCAGTACCATATGTTTTagatgtgtatatgtatatatatttacacacacacctacacctGTGTTTTGTTACTGCTATTTCCACAGTTACATATGGAACCCTATAGGTGACACTACAGAAATCTATGttcatcttaataaaaacatttcaacaccTCTAGGTTGAAagtgaagaaaattaaaataattcagagatTCCAAAAGTATTGTGAAGTGCAATTTGATTTTAACCACCTTCATTGAAAATGACATGCATGTACAGCTTAtgctacaatgtaaaatatgatgATACAATTGAAGTtacaagaacatttaaaaatgtacttctgTTTGAAGCAACACTctgatttcaaaaatatttgaaagtttAAAACTTTAATCATGAAACCAACAAGTTGAAGGCCATATATTCccgctgtctcgaccagactACACAGAGTtacctcgtctccccatacatcccctccagaccactgtggtgccaaaagactaactctgcctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43922 True 607 lncRNA 0.32 1 29771586 29772192

Neighbor

gene id symbol gene type direction distance location
AMCG00019557 NA coding downstream 4980 29761329 ~ 29766606 (-)
AMCG00019546 NA coding downstream 329809 29440921 ~ 29441777 (-)
AMCG00019544 NA coding downstream 366564 29404063 ~ 29405022 (-)
AMCG00019545 NA coding downstream 367588 29403341 ~ 29403998 (-)
AMCG00019543 NA coding downstream 471049 29278797 ~ 29300537 (-)
AMCG00019555 wrnip1,LOC103135799,LOC106941779 coding upstream 1493 29773685 ~ 29785242 (-)
AMCG00019564 foxc1,foxc1a,LOC103370816,LOC104941097,LOC106532673 coding upstream 364539 30136731 ~ 30138161 (-)
AMCG00019563 foxf2,LOC102792585 coding upstream 395323 30167515 ~ 30172280 (-)
AMCG00019566 NA coding upstream 411323 30183515 ~ 30184507 (-)
AMCG00019571 irf4a,irf4,LOC108267998,LOC107565529 coding upstream 676001 30448193 ~ 30462200 (-)
G35111 NA non-coding downstream 39819 29718345 ~ 29731767 (-)
G35083 NA non-coding downstream 137850 29632194 ~ 29633736 (-)
G35014 NA non-coding downstream 821356 28949967 ~ 28950230 (-)
G35002 NA non-coding downstream 945918 28825320 ~ 28825668 (-)
G34968 NA non-coding downstream 1124319 28640232 ~ 28647267 (-)
G35144 NA non-coding upstream 54465 29826657 ~ 29828650 (-)
G35145 NA non-coding upstream 75452 29847644 ~ 29847858 (-)
G35157 gmds,LOC107721371,LOC107556133 non-coding upstream 309458 30081650 ~ 30126330 (-)
G35190 NA non-coding upstream 640006 30412198 ~ 30442590 (-)
G35214 NA non-coding upstream 734878 30507070 ~ 30520464 (-)
G35101 NA other downstream 86284 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 125623 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 221424 29535744 ~ 29550162 (-)
G35067 NA other downstream 249602 29517996 ~ 29521984 (-)
AMCG00019500 pign other downstream 5676922 24052011 ~ 24094664 (-)
AMCG00019597 NA other upstream 1649837 31422029 ~ 31427583 (-)
G35476 LOC107575789 other upstream 2449872 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 4738541 34510733 ~ 34522270 (-)
G35867 NA other upstream 5282827 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 6162604 35934796 ~ 35981536 (-)

Expression


Co-expression Network