G35243


Basic Information

Item Value
gene id G35243
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 30592941 ~ 30674883 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU44073
ttgtttcaaaagaaaacaggtTTATTATCAATCAAATTAAGCCACACCAGTAATGTTAATTCACACAGCATTCTAATTTCATAAAAATGGTCTAATACACTGctattgaaagaaaatgaagaggGTGTTTTAGAAACATCTAATGAAGATGAACTTGGGTATGCAGGTTTCAAAACACAGCACTTTTGTTAAtagttttttctaaaaaaagtctaaattagtctaaaaaaaaaccaaaactaaaaacaattagGGTGCTCATCAAATGTGCCCTGTATGCTtttctacaaacaaacaaaaaacatcagcaaATGGAACTAATATACAGTGTTTTGAGGCAAACATATTGAAAAGAATATCTGTAAGTATGTCACTGAAATGATTAGAAACAAATGTTACCCATATATACTAATTTAATCCaattaatataacaaatacaagtaATTCCAGTCTTCCCTCATGATTTCCCTCATTCACCTGAATTCACTcaaattacattacagtttGGGCCATTTCGAGTTTTAGAAGCCACAAGCTCTTGTGAATAAGACatgaagatctgggcatcatcagtatagaagtggtaggataaaccatgggatgcgatgagggagGGTGCTAGGCCTAGGATGTGTAATATTATCATTCATTAATCCTGCATACAAACATGTAaagataaacaatataaaaatatgagaTTTTATAATGGAGATTTAAAACATGcaaggtttaaaataatgattcaaagatttttatttccatctaCTACTAAAATATATGATAAGAATTTAGAATAAGGATGAGTAATAAGGAGAGAGGTGAATAATACATTCTTCTGTGTATAATAGGAAACACAGTGATCATAGTTATAGAACAAAGATGttacaaatgctttttttttttttttttttttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44073 True 924 lncRNA 0.29 2 30592941 30674883

Neighbor

gene id symbol gene type direction distance location
AMCG00019575 NA coding downstream 1661 30577177 ~ 30591280 (-)
AMCG00019573 tbb2c,LOC107393497,LOC105029894,LOC105891054,LOC105023713,LOC106593669,LOC106575097 coding downstream 24752 30566036 ~ 30568189 (-)
AMCG00019572 NA coding downstream 115894 30473446 ~ 30477047 (-)
AMCG00019571 irf4a,irf4,LOC108267998,LOC107565529 coding downstream 130741 30448193 ~ 30462200 (-)
AMCG00019566 NA coding downstream 408434 30183515 ~ 30184507 (-)
AMCG00019581 NA coding upstream 180055 30854938 ~ 30857867 (-)
AMCG00019582 NA coding upstream 201368 30876251 ~ 30894784 (-)
AMCG00019583 LOC103354709,LOC102798054 coding upstream 233981 30908864 ~ 30919174 (-)
AMCG00019584 adcy1,LOC103399855,LOC105011947 coding upstream 272824 30947707 ~ 30979946 (-)
AMCG00019585 NA coding upstream 397293 31072176 ~ 31078281 (-)
G35214 NA non-coding downstream 72477 30507070 ~ 30520464 (-)
G35190 NA non-coding downstream 150351 30412198 ~ 30442590 (-)
G35157 gmds,LOC107721371,LOC107556133 non-coding downstream 466611 30081650 ~ 30126330 (-)
G35145 NA non-coding downstream 745083 29847644 ~ 29847858 (-)
G35144 NA non-coding downstream 764291 29826657 ~ 29828650 (-)
G35304 NA non-coding upstream 362241 31037124 ~ 31037337 (-)
G35397 mak,ick non-coding upstream 733099 31407982 ~ 31410657 (-)
G35448 NA non-coding upstream 1071742 31746625 ~ 31746866 (-)
G35458 NA non-coding upstream 1397174 32072057 ~ 32072286 (-)
G35471 NA non-coding upstream 1507141 32182024 ~ 32183570 (-)
G35101 NA other downstream 907639 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 946978 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 1042779 29535744 ~ 29550162 (-)
G35067 NA other downstream 1070957 29517996 ~ 29521984 (-)
AMCG00019500 pign other downstream 6498277 24052011 ~ 24094664 (-)
AMCG00019597 NA other upstream 747146 31422029 ~ 31427583 (-)
G35476 LOC107575789 other upstream 1547181 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 3835850 34510733 ~ 34522270 (-)
G35867 NA other upstream 4380136 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 5259913 35934796 ~ 35981536 (-)

Expression


Co-expression Network