Gene
RNA
| Item | Value |
|---|---|
| gene id | G35476 |
| gene name | LOC107575789 |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 32222064 ~ 32233398 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase zeta-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU44357 | True | 712 | TUCP | 0.44 | 2 | 32222064 | 32233398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019599 | NA | coding | downstream | 692638 | 31521564 ~ 31529426 (-) |
| AMCG00019596 | NA | coding | downstream | 754423 | 31456128 ~ 31467641 (-) |
| AMCG00019598 | NA | coding | downstream | 789501 | 31429321 ~ 31432563 (-) |
| AMCG00019592 | NA | coding | downstream | 881065 | 31316662 ~ 31340999 (-) |
| AMCG00019590 | NA | coding | downstream | 932313 | 31259809 ~ 31289751 (-) |
| AMCG00019608 | NA | coding | upstream | 12434 | 32245832 ~ 32246580 (-) |
| AMCG00019606 | NA | coding | upstream | 64079 | 32297477 ~ 32307436 (-) |
| AMCG00019607 | NA | coding | upstream | 84085 | 32317483 ~ 32325501 (-) |
| AMCG00019611 | NA | coding | upstream | 99058 | 32332456 ~ 32352846 (-) |
| AMCG00019610 | ralyl,LOC108431401 | coding | upstream | 127211 | 32360609 ~ 32391262 (-) |
| G35471 | NA | non-coding | downstream | 38494 | 32182024 ~ 32183570 (-) |
| G35458 | NA | non-coding | downstream | 149778 | 32072057 ~ 32072286 (-) |
| G35448 | NA | non-coding | downstream | 475198 | 31746625 ~ 31746866 (-) |
| G35397 | mak,ick | non-coding | downstream | 811407 | 31407982 ~ 31410657 (-) |
| G35304 | NA | non-coding | downstream | 1184727 | 31037124 ~ 31037337 (-) |
| G35481 | NA | non-coding | upstream | 52018 | 32285416 ~ 32285686 (-) |
| G35484 | NA | non-coding | upstream | 63455 | 32296853 ~ 32297284 (-) |
| G35516 | NA | non-coding | upstream | 96223 | 32329621 ~ 32330419 (-) |
| G35526 | NA | non-coding | upstream | 249824 | 32483222 ~ 32496523 (-) |
| G35537 | LOC100846954 | non-coding | upstream | 605435 | 32838833 ~ 32874693 (-) |
| AMCG00019597 | NA | other | downstream | 794481 | 31422029 ~ 31427583 (-) |
| G35101 | NA | other | downstream | 2536762 | 29679229 ~ 29685302 (-) |
| AMCG00019554 | zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 | other | downstream | 2576101 | 29638566 ~ 29645963 (-) |
| AMCG00019556 | NA | other | downstream | 2671902 | 29535744 ~ 29550162 (-) |
| G35067 | NA | other | downstream | 2700080 | 29517996 ~ 29521984 (-) |
| AMCG00019645 | NA | other | upstream | 2277335 | 34510733 ~ 34522270 (-) |
| G35867 | NA | other | upstream | 2821621 | 35055019 ~ 35055444 (-) |
| AMCG00019665 | NA | other | upstream | 3701398 | 35934796 ~ 35981536 (-) |
| AMCG00019698 | NA | other | upstream | 5656046 | 37889444 ~ 38110224 (-) |
| AMCG00019724 | dip2c,dip2ca,LOC106522911,LOC106532211 | other | upstream | 7183489 | 39416887 ~ 39505562 (-) |
