G35792


Basic Information

Item Value
gene id G35792
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 34506033 ~ 34578472 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU44747
gttcaATACTACAAAGCTGCCTAACACAATAACACTGAAACAAGGGAAATACTTAATGTGGCAGGTAGCATTGGCATATAGACaggacgaaacaaacaaacaaacaaaacacatatgtGAAAGTAATTACAATACATTCTGGAATAAAACACTTCATAATTAGTTATCATGCATGtataataacatttgtaatggcacattatttttaacttgcTCCTTTAAAAAGATTATCCTGTCTCAAggatcaaaacaacaaacacagttTTTGATTctccaaaccaaaataaaacaaaacaaaacattataaaattattgcatttttatatatgaattCTGTATAAATCTTAAGCAAGGCATCTTGTCGTATTACCCACACGTGGATAAGCAATGATTGTCATTAtcaaaatggctattattcttCACTTgagcacaaaaaatatataatatatacagaggAACATAATTATtccctttttctctttcagctTATGAAGGATATGCTTTGCTATGTGTTGGCTTTCCAGTTTGATTTTATCAACCCTGTATTTCTTATTCAcaataagaaatatttaaaacctaGATACTAAAGCTGTGTATACTAAAATAAGCCTTTGAGACTTTGCTATTTCTTATGCTAATCATTTCTCTGCTTCTTCAATGGTGTTACATCCCTTATTCACAAATGTACTGCAGTATAGCAGCTGAAAACCTCAGTATAGTGTGGAAAAGCCATGGGAAAACTACCAAATCACTGTGCAAAATTTACTGTGGTCAACTTCATAAGGGAATGTTTACGAATATCCGTCACAGAGTCCTGAATGTTTATCAGGAACTCGGCACGTGCACCGTGAagcatatgaaaaaaaaataggttttcATTTTCTACACGGGTCAACGTTTTAAGCCTTGATAACAGTGATGGTAATGCTCCGTCGCTTTTTGGAGGGGCAcctcgctttttttttttttttttttttttttcctttctcggTAACCTGACAGTTTGTGAAACGAGCTGAAAGCCCGCCCTGGATACAAAAAACCCCACAACACTGTGTTCTTCACACTCTCTGCAGGCACAAGTGTCTCGCAGTCTTACAGGTTAACCCAAACAGTGAGGACAAGACTCAAAAACagtgagaaagacagagacaacGTGGGGGCACACCCTGAGAAGGTCAGTGTGGACACCTTCACCTCAGACGTAAGGAACGCCGACAGGGGGACGTGTGACACCAGCGTGGGACTCCCGTAGTTTATCAGCGAGTCGATCTTCTCTGCCTCCTTATTGCAAGCTTCAACCTGAATGATACAAATAAAGGGACACTTGAGGATGGAATAACAGTCCAGCACAGGGCGATGGAGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44747 True 1369 lncRNA 0.38 2 34506033 34578472

Neighbor

gene id symbol gene type direction distance location
AMCG00019634 NA coding downstream 381415 34120362 ~ 34124618 (-)
AMCG00019633 NA coding downstream 390913 34090291 ~ 34115120 (-)
AMCG00019630 NA coding downstream 453545 34036361 ~ 34052488 (-)
AMCG00019631 NA coding downstream 471107 33931143 ~ 34034926 (-)
AMCG00019629 rsu1,LOC107657774 coding downstream 581080 33901289 ~ 33924953 (-)
AMCG00019646 NA coding upstream 141199 34719671 ~ 34727267 (-)
AMCG00019644 NA coding upstream 244244 34822716 ~ 34832157 (-)
AMCG00019643 NA coding upstream 272516 34850988 ~ 34855000 (-)
AMCG00019648 LOC108431216,LOC105019475,LOC108271758 coding upstream 313994 34892466 ~ 34937832 (-)
AMCG00019647 hecw1,hecw1b,LOC107599276,LOC107656133,LOC107662981 coding upstream 394338 34972810 ~ 34982687 (-)
G35735 NA non-coding downstream 442899 33996555 ~ 34063134 (-)
G35690 NA non-coding downstream 725578 33780221 ~ 33780455 (-)
G35656 NA non-coding downstream 835528 33670211 ~ 33670505 (-)
G35652 NA non-coding downstream 842871 33662751 ~ 33663162 (-)
G35637 NA non-coding downstream 917493 33588314 ~ 33588540 (-)
G35803 NA non-coding upstream 66663 34645135 ~ 34650231 (-)
G35810 NA non-coding upstream 72230 34650702 ~ 34650987 (-)
G36016 NA non-coding upstream 1476007 36054479 ~ 36061297 (-)
G36038 NA non-coding upstream 1589494 36167966 ~ 36168171 (-)
G36074 NA non-coding upstream 1820940 36399412 ~ 36399659 (-)
G35476 LOC107575789 other downstream 2272635 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 3078450 31422029 ~ 31427583 (-)
G35101 NA other downstream 4820731 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 4860070 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 4955871 29535744 ~ 29550162 (-)
G35867 NA other upstream 476547 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 1356324 35934796 ~ 35981536 (-)
AMCG00019698 NA other upstream 3310972 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 4838415 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 5391703 39970175 ~ 40123987 (-)

Expression


Co-expression Network