G35812


Basic Information

Item Value
gene id G35812
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 34663069 ~ 34714039 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU44770
tttaggtgagtgtatattNNNNNATTATGGGATAGAAtccaatgaaaaaatatgaatatgggtTTTCTAAAATGCACTCTCCTACTGCTGAGCCTTACTTTGAACATAAGTAGAAGAACATCCACCATGTTGCTAGATGTCTTCATGCATCAGTGAGGTATTGTACTTGTACTACAGAGGATTGCACTTAATATGAAGTTGGACAGAACCCTGTCACTCATCTGTGCACAATGTGGTCGTAGAATTAGTCCACCGTGGCTGAAAACCCGCTCAATAGGTGCACTTGCTGCTGGTACAGCTAATGCCCTCACTGTCACAATAAAGACTGATGGCAGAGGTTTCCTATTCATAGCCCAGAACAGGAAGCTGTTTTGTCCTTCACACATTGTGAGGCACTGGCTGAGCTGAGAGGCAGGGGAGGTGTGACCATCTCTCCTTTGCCTCTTGTGATAAGCAGCAAACAATCCTGCATCTTCTTCAGTGCACTGAGCCTCCTCCTCTGTTTCTGCAGCATCCATGTGACCAGCCTGCTGTGCATCACGCAAGATCAAATCTGAAAAAGGcaacactatacacacacatttaaaccaTGCATAATTTGAGGACCATCAGGttgacatttaaattcaaatcaatAAGGCAgataaattgtttattaattgtaatgttcttaaaaataattaaaagtatacACACCTTTTACTGTGCCAGCAACCTCACTCTTGGCATTCTCATCAAGAAGAACATGATGTTCAAGCCACATCAGGCCAAACGAGGGATCAAGCACAGCTGCTTTTAGGTACAGTGGGTCTAAGAAAGGCAGGGGCTCTCTGCTTGATGTCTCAGCCATTCTGACATTTGTAAAGATTTGTAAAGAATTTGATGCACTTTTGTACTCCCAGCAAGCAAAAAGCtaactttaataaaaatgggacTACAACACCAGATGCTACCTTGATATGTCCTCCCCCACCAGCGCTCTACTCCTGCCGCCCGACCTCAGTTGAAAGCATAGCTACCACATTCTCTTGTACatttgatacataatttaagcaACTTTAGCACTTTATGACTCCGTTTAGAGATAACAGGCTAGCTAAAACTACTAAAATAGACATTAACCGATTGTGCTACAATGTAGAAAGTTGCCGCTGAGCTAGCTAGGTGATCGTGCTTGGGACAGCGAAGACATGATAGCTAGTGGAGGAGACGTCACAGGCATGCGCCTGTAATGTATTCCCGTTCTTCAAAAAGTTAGCATTTTGTTAGCTTTTCCTTGCTGTCGGTTATTTTGTGCTTCAAGACCTATAATTGCGGAATGTGTTGAAAGAGGGCAACTTCCACAACAAAACATATAAGATGGCCTAAGACTGTGTTGAACGTAGACCTGAGTGATTTTTCTGAATCTCTATGGGGAAAAATGAATGGGATTTATGTGTTAGGAACCGGTGACGACACCACTTCGGTTCTCTATTGTCTTTGGTGAGAGTCTGTGCCCAAGGACACATAGTATAGCCCTGACACAATTAGCACCGTATTCATCCGCGTACTGCCGCGCATCCATTTGAATATATCAAgaaatgtacaataacaaacaacataaaaatgagaaaagtgagttttcttttttctagtCACGCCAAGTAAAACACCCggaagtcaagtcaagtcacaAGTCAGTGATTGACAATtcagtcaagtcaagtcaagtctcggtcatttcagcttttttcttGTCAAGTCCCAAGTCTCATAAATTCTGACTCGAGTTAACTCGAGTCCCAAGTCACTTGACTCAAGTCTACATTTCTGCTTAGGGTCAGTAtgttttaaacatatacatCGACCAGCAAACCCGTCctcaatataaataatgtaatacgTGAAATGTGCATCTCTGTCAGAGTCTCTTCTAAATCTGCTTCTTTTACCTCCCCTGCAAAAAAGCTCTGTGCTGCTCACCAGAActcttttgctgttgtttttctctccagtgAAATGCTTAATTGCTTAGCTTTATTGTTTCCACAATTTTCTTATTTAgtgctgtgtttctgtcctCAGTCCTTGGCATCAGAAATGCCCTCCTTGAGGCGTGTTGTTGCCAGTACATTGAAAAAAGAGATAAATGTCCTGCCTGTCTTGTTTAAGAAACTGCTGCTCCCTGAAATGCCTTTTAATCTGTTACCAATGAATGATGCACAGCCCAGGTGCTATTAATACTGTATCAGTTATTGCCATCATAACAATTGTTAACTGTATGTGGTCTCAGAACCAAATAATTGGTCATTAACTGCTCACCTCAGTGAAGGGAGTTCTGAAACCCTCCACAGGATACAGGGTTCAAACTCATTTCTAATGGCCAATGAGAtgcatcaaaacattaaaaaacaactgcgGAATTACAGTACAGCTGTATAAAGGCTTTAATGAAGGGTTATGTTTCTTTATGATTCTTGCATCCAAACAGGCACAATCTGAGGAGATGGAAGCATGAGCTTTGATATAAAGCTGTGTGAATCCAGAGcccttctgttttgtcagaccACATTGCAAACATCAGATTAAAAACATCAGCGTTAAACTTGTCTTTTGAAGCTTTTCCTTTAAATCAGTTTACATTTGTAACTGGTGTGCATTTATTCACCAGACTGTTTCAGAGTCCTCAGTGCACCTATTCTTGGTAGAACTGGAAAGTAACTAAGAAAAAAGGTAAAGGGAGTATTTGTTTGATTCATTTAATGTGTTcattcacttaaaaataaatgttaaaggTTTACTTATTTAACCTTAATCCTGCAGTGAATCCCCTATGCAATATTGGGCACAAATCTAATTcttccacacacaaaaatccCCAGAACAAGcaaacatgttatttttgtttagggAAGAGTTTTCTCAGTAACCGTTTTCTGTAATGTCTGTCTTTAAAAGATCAGGTGTAGTATCTTTAATGTGTGCAGTCTATTCGTTTATGTGTATTGAATCTGTGATGTCATCTCTACAAAGGCATATGTAAGAAATGTATGGTCCCATGTTTTCCAGTTGTCGTTCGTCACCTACAGTGTGCAAAAGGAAAGCCTCTTCTTTGGATTTGTTTGTGCTTTGTAcacatttacttttcaaataaaatgca

Function

NR:

description
PREDICTED: rho GTPase-activating protein 25-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44770 True 3139 lncRNA 0.40 2 34663069 34714039

Neighbor

gene id symbol gene type direction distance location
AMCG00019639 tgfbr1,tgfbr1b,LOC108441711,LOC107561948,LOC107100676 coding upstream 12811 34628457 ~ 34650258 (+)
AMCG00019637 LOC106569208 coding upstream 220265 34389213 ~ 34442804 (+)
AMCG00019636 gfod1,si:ch211-276f18.2,LOC108436094 coding upstream 354125 34218907 ~ 34308944 (+)
AMCG00019635 LOC106590280,LOC105019483 coding upstream 448526 34180782 ~ 34214543 (+)
AMCG00019632 NA coding upstream 562557 34093727 ~ 34100512 (+)
AMCG00019651 pfkp coding downstream 392087 35106126 ~ 35148291 (+)
AMCG00019653 NA coding downstream 637404 35351443 ~ 35374283 (+)
AMCG00019660 NA coding downstream 1002306 35716345 ~ 35732258 (+)
AMCG00019669 NA coding downstream 1473013 36187052 ~ 36190796 (+)
AMCG00019670 tyms coding downstream 1483012 36197051 ~ 36201191 (+)
G35799 NA non-coding upstream 66136 34596727 ~ 34596933 (+)
G35709 NA non-coding upstream 737700 33924845 ~ 33925369 (+)
G35691 NA non-coding upstream 875284 33787518 ~ 33787785 (+)
G35689 NA non-coding upstream 898122 33764721 ~ 33764947 (+)
G35658 NA non-coding upstream 938296 33679123 ~ 33724773 (+)
G35816 NA non-coding downstream 25850 34739889 ~ 34740119 (+)
G35820 NA non-coding downstream 95620 34809659 ~ 34810041 (+)
G35874 NA non-coding downstream 363000 35077039 ~ 35085950 (+)
G35880 NA non-coding downstream 384668 35098707 ~ 35098917 (+)
G35933 NA non-coding downstream 1000375 35714414 ~ 35715003 (+)
AMCG00019638 LOC107757182 other upstream 84629 34454209 ~ 34578440 (+)
AMCG00019609 NA other upstream 2270093 32324400 ~ 32392976 (+)
AMCG00019605 NA other upstream 2345498 32310037 ~ 32317571 (+)
AMCG00019551 lsm5 other upstream 5358063 29300955 ~ 29305006 (+)
AMCG00019535 NA other upstream 5952182 28613255 ~ 28710887 (+)
AMCG00019641 NA other downstream 126277 34840316 ~ 34851323 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other downstream 1332438 36046477 ~ 36063850 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other downstream 1578307 36292346 ~ 36299547 (+)
AMCG00019676 NA other downstream 2464320 37178359 ~ 37213519 (+)
G36212 NA other downstream 2799948 37513987 ~ 37516027 (+)

Expression


Co-expression Network