G36267


Basic Information

Item Value
gene id G36267
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37738275 ~ 37740601 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU45330
TCAAcatataatttttattaattgataaaatGGAATGATAGGGTGGAAGTCCTTCCTGACCGCTCTATTCAAACAGCACAACTAAACACGGGAACCGGAATCGGCAACTGAGtggaaataaaatctgaagGTTTACATCTAGTCCAGTTATCGCtcacaattaaatatgtaaaaatagtaATGGCAAAGCCATTTAAAAGCATATCCAGAGCCATTTACAAGAAGATTACGacagctttaaaaaagaaaaaaaaaaaaaaaattgtgcagAAGTTTACATTAAACAGGCGACTCTGAGCAAGGTTACCCCATTTTTTTATACCGCCAAACTGTCTCTTCAATAAAGTCTggatgaaataaatattcactAAACTACAATTGCACTCGTCTTTATGAATTATGTAGGCCAAgcttaacatttaaacaaattgaaattacTTGCCaactttttagtttgtttaacaGTGGAACCTACAGTTCCTTGTTTTACTGAAATTTCAGAAGTGATGCTTTTGTTACTTCTACTAACTAGACAAATCACATTCTACCTATAAagattcatttgttttcaatacttGAAGTGACTTGTCTGTCACACACTTTCAGGagaatatatgtgtatatatacacagacacacccacacatatattatatatacacatgtgtgtgtatacgtgCGTATGTGTGTCACAGACCATTAAACATAATACAGGAAGCATTCATATAGCAATACACAGTCTCTTCTTAATACATTGAAGACTTTAATAACTAATGTAAATTCCTCATCTCCctgcacattgaaataaaatacaacagttCATGAGGCACAATGAGTTTCTGGTAAGCATGATTCTATTAATACCTTGGTCAGTCATTGCTGACTTTCTAAAAACTGGAACATATATTCCACAATGTTATATATCACAAAGGTTAATGTCCCAAACCTTTCAAAGAAGACCACATGCTGGGATTGGTAATAcctacatatatatgcatatatacaccaTCCCTCTAGAAGTGTCCAGACACTCAAAGCAAGCTGTCAAACGTTATGTATTGAGGTTAGGATATAAATGCAGATCCCTTGTATATCAGAAACTTTTTTACAGGTGTTATTTCATGCGGAGCAACAGGACACACACATCTGGAATGAAGTTAGGAAAACGTACCTGAAAGAACGAACTAGGGATTCTTTCAACGCCGCAATCAGAAACTGAAAACTATttcctgaaatgttttgtgacaatatacatattttgatatACATGGACATTTCCTGCAGCTAGATTCGGGATAGCATGTAAGGAACACACATATGCTTCTAGTCGAGCATCTAAAGGTTGTAGCCAATACAagtaacaagaaaaataaaaataaaaactaaacatgtaGGAGCGGCTGGAGTAAACGGATGATGTCTGGACAGTTGGTACAGGGATGTGTATATAaatcacatacatatatatttctttttatattatgCAGGCATGAATTaggaatacatttaatgaatatatatttcatccTACGTGCATTTATTTCCGTAAACTCTGTAAAGTTACAAAACCATCTTATATCTTCAGCCCTGCAGTAGAGATTTGAAGACTGAAATTTTATCCTAATGTAACTACTTTCCTGATCTTGCGATGTTATTGACAATACAGAGATGATATTAACGTTAAACGGTCAAGCTTAAATGGATAGAATCTGAAGAAGGCTGCCTAAGTTTGGTAAGCAGGCAGGGTACTTGTGTGTagattaatgtatatgtatataatatatatatacacatacacacacatatacatacatatcttTGAACAGTATAGACAGAGATGTTAAGTAAGTGCTAGATTCCAAGGATGGCTACAGCAAACCATGTAAGGCGTGCCAGATTCCAAGGCTATGATAATACTGGTAAAGGCAGGATAACACagtatatttacaatacatatgTACTTTACACCTCATGAGGTGAAcctacatgttttttatttttattttgtttttcttgttttaacagCAGCTATTTACATGTTTGTGCCCAGCGTTAGAGAGTGGCACCGTCTTACATCTTGCAGCTGGACAGAAGCCTGATGCTTTACATGAATGATGTGCCAAACGCAAGTCCACTTCTCTGCTAGTCAGACAGGATGTGAACGAATGACATGGGGAACACGCCCTTTCTTTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45330 True 2194 lncRNA 0.35 2 37738275 37740601

Neighbor

gene id symbol gene type direction distance location
AMCG00019684 LOC107742139 coding downstream 148214 37565270 ~ 37590061 (-)
AMCG00019688 NA coding downstream 245406 37491236 ~ 37492869 (-)
AMCG00019686 NA coding downstream 249133 37458093 ~ 37489142 (-)
AMCG00019683 NA coding downstream 313157 37421416 ~ 37425118 (-)
AMCG00019687 chmp5,LOC106590149,LOC106578693 coding downstream 339648 37391306 ~ 37398627 (-)
AMCG00019692 si:dkey-37o8.1,LOC108434235,LOC107681461,LOC108256503,LOC105019383 coding upstream 908 37741509 ~ 37745656 (-)
AMCG00019701 NA coding upstream 467281 38207882 ~ 38222789 (-)
AMCG00019703 NA coding upstream 522291 38262892 ~ 38263670 (-)
AMCG00019702 NA coding upstream 525753 38266354 ~ 38269323 (-)
AMCG00019704 LOC106590158 coding upstream 602371 38342972 ~ 38350616 (-)
G36184 NA non-coding downstream 366147 37369106 ~ 37372128 (-)
G36172 NA non-coding downstream 411281 37325798 ~ 37326994 (-)
G36160 NA non-coding downstream 552119 37167433 ~ 37186156 (-)
G36097 NA non-coding downstream 816469 36921583 ~ 36921806 (-)
G36095 NA non-coding downstream 826296 36911626 ~ 36911979 (-)
G36284 NA non-coding upstream 232852 37973453 ~ 37973683 (-)
G36312 NA non-coding upstream 378119 38118720 ~ 38118934 (-)
G36349 NA non-coding upstream 713423 38454024 ~ 38454309 (-)
G36386 vps41 non-coding upstream 878240 38618841 ~ 38619657 (-)
G36456 NA non-coding upstream 1337902 39078503 ~ 39081979 (-)
AMCG00019665 NA other downstream 1756739 35934796 ~ 35981536 (-)
G35867 NA other downstream 2682831 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 3216005 34510733 ~ 34522270 (-)
G35476 LOC107575789 other downstream 5504877 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 6310692 31422029 ~ 31427583 (-)
AMCG00019698 NA other upstream 148843 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 1676286 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 2229574 39970175 ~ 40123987 (-)
AMCG00019741 NA other upstream 4330461 42071062 ~ 42078932 (-)
G36817 NA other upstream 4803515 42544116 ~ 42544524 (-)

Expression


Co-expression Network